当前解析结果
SmilChr02G001193| 统一新 Gene ID | SmilChr02G001193 |
|---|---|
| 名称 | SmilChr02G001193 |
| 描述 | uncharacterized SmilChr02G001193 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 21960173 - 21963698 / + |
| NCBI Gene ID | LOC131011571 |
|---|---|
| GeneID | 131011571 |
| locus_tag | - |
| NCBI Name | LOC131011571 |
| 原始查询 | SmilChr02G001193 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | actin cytoskeleton-regulatory complex pan-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841488]; symbol=AT1G50660; hit=AT1G50660; species=arabidopsis; confidence=high |
| 产物 | actin cytoskeleton-regulatory complex pan-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841488]; symbol=AT1G50660; hit=AT1G50660; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G50660 (AT1G50660)actin cytoskeleton-regulatory complex pan-like protein [Source:NCBI gene (formerly Entrezgene);Acc:841488] identity=57.4; qcov=0.999; evalue=0; confidence=high |
| Rice | Os04g0625000- identity=46.3; qcov=0.95; evalue=1.39e-157; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011571 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057795322.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057795322.1 |
| 3 | Cytoskeleton | 细胞骨架 | 0.40000 | XP_057795322.1 |
| 4 | Nucleus membrane | 核膜 | 0.20000 | XP_057795322.1 |
| 5 | Cytosol | 细胞质基质 | 0.20000 | XP_057795323.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:21960485 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B106,C71 |
Chr2:21960750 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr2:21962173 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B118,B41,B61,C22,C51 |
Chr2:21962239 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A18,B5 |
Chr2:21962647 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B19,B77 |
Chr2:21962707 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B26 |
Chr2:21962803 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | D10,D11 |
Chr2:21963036 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B107 |
Chr2:21963045 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B127,B98 |
Chr2:21963292 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。