Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G001245`

染色体: Chr02 坐标: 22853107-22856497 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G001245`
名称	SmilChr02G001245
描述	glucose-6-phosphate/phosphate translocator 1, chloroplastic-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	22853107 - 22856497 / `-`

ID 对照

NCBI Gene ID	`LOC131011617`
GeneID	`131011617`
locus_tag	`-`
NCBI Name	`LOC131011617`
原始查询	`SmilChr02G001245`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glucose-6-phosphate/phosphate translocator 1, chloroplastic-like
产物	glucose-6-phosphate/phosphate translocator 1%2C chloroplastic-like
Arabidopsis	`AT5G54800` (GPT1) glucose 6-phosphate/phosphate translocator 1 [Source:NCBI gene (formerly Entrezgene);Acc:835570] identity=81.1; qcov=0.907; evalue=0; confidence=high
Rice	`Os08g0187800` (OsGPT1) - identity=78.5; qcov=0.904; evalue=0; confidence=high
GO	GO:0005794 (Golgi apparatus); GO:0015120 (phosphoglycerate transmembrane transporter activity); GO:0015297 (antiporter activity); GO:0016020 (membrane); GO:0055085 (transmembrane transport); GO:0071917 (triose-phosphate transmembrane transporter activity)
KEGG	-
Pfam	PF00892 (EamA); PF03151 (TPT)
InterPro	-
eggNOG	-
NR	GeneID:131011617

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057795372.1`
2	Chloroplast membrane	叶绿体膜	1.00000	`XP_057795372.1`
3	Nucleus	细胞核	0.00000	`XP_057795372.1`
4	Chromosome	染色体	0.00000	`XP_057795372.1`
5	Centromere	着丝粒	0.00000	`XP_057795372.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:22854256`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B109,B126,C60,C79,D2
`Chr2:22854309`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A19,B57,B74
`Chr2:22855322`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B32,C71
`Chr2:22855442`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:22855488`	`T`	`TGA`	2bp_insertion	frameshift_variant	3	B53,B93,C20
`Chr2:22855488`	`T`	`TGA`	2bp_insertion	CDS_variant	3	B53,B93,C20
`Chr2:22855605`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B131,B9,C26,C41
`Chr2:22855624`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B32,C71
`Chr2:22855681`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:22855684`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B14
`Chr2:22855724`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C57
`Chr2:22855756`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C72

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057795372.1

398 aa

199

398

TPT

EamA

PF03151 TPT 94-382 aa PF00892 EamA 100-226 aa

XP_057795373.1

386 aa

193

386

TPT

EamA

PF03151 TPT 94-382 aa PF00892 EamA 100-226 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057795372.1`	Pfam	`PF03151`	TPT	Family	94	382	2.6e-114	382.3	Triose-phosphate Transporter family
`XP_057795372.1`	Pfam	`PF00892`	EamA	Domain	100	226	1.1e-10	42.6	EamA-like transporter family
`XP_057795373.1`	Pfam	`PF03151`	TPT	Family	94	382	2.4e-114	382.4	Triose-phosphate Transporter family
`XP_057795373.1`	Pfam	`PF00892`	EamA	Domain	100	226	1.1e-10	42.7	EamA-like transporter family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057939390.1
CCGGGCTGGACATTGAAGCAGCGCCTGAGAGTTTATGTGAATTTTATTGAGAATCTGTCACGTGTTGGTTCGATTGGTCCGAGCCAATGGAAGTAAGCATAGAATGGTTGGTATGGACTTTGGCTTTGCTTCCGTCTCCTCTTTCTCTGTTTGGGGTTTTGTCTTGTGAATTTCGCAGCTATTGTAAATGTAATTGTTGTTAGTACAACACTATTTAGAGTTGGTAGGTTGCTTAACACATACAAAAGCCAATTCCTTTC...

XM_057939389.1
CAATGGAAGTAAGCATAGAATGGTTGGTATGGACTTTGGCTTTGCTTCCGTCTCCTCTTTCTCTGTTTGGGGTTTTGTCTTGTGAATTTCGCAGCTATTGTAAATGTAATTGTTGTTAGTACAACACTATTTAGAGTTGGTAGGTTGCTTAACACATACAAAAGCCAATTCCTTTCTATTCTGTCCTTTGGAACTACCAAAGCTTCAAAACTTTCTATCTTTCTACGTATAAATACCTCTCAAAAATTTCAAAACCCCCC...

CDS

2 records

下载 CDS FASTA

LOC131011617
ATGATCTCCTCTCTCAAGCAGTCAGCGTGTTCTTCGATCGTCCATGGCTCCGATTTTCCCACTTCGAGGAGAAATTTGGCCACCGCCCGGTGTTTGCCGGTGTTGCCGTCGCCGCTAGGGCTTCGCCGGCTCTCAGCTGTTTCTCTCTCTAAACCGCTGTACATTACATCTATCGAAAGAAAGGAGCGCTCTCCGATCACCTGCGCGGCGTATGAGGCCGAGCGGTCGGAACCGGTGCTGGATGCGGCGGCGGCACGATC...

Protein

2 records

下载 Protein FASTA

XP_057795372.1
MISSLKQSACSSIVHGSDFPTSRRNLATARCLPVLPSPLGLRRLSAVSLSKPLYITSIERKERSPITCAAYEAERSEPVLDAAAARSESARKVKIGIYFATWWGLNVIFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLVSWALRIAETPKTDLEFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSKFILGESFPPGVYLSLLPIIGGCGLAALTELNFNMIGFMGAMISNLAFVFRNIFSKKGM...

XP_057795373.1
MISSLKQSACSSIVHGSDFPTSRRNLATARCLPVLPSPLGLRRLSAVSLSKPLYITSIERKERSPITCAAYEAERSEPVLDAAAARSESARKVKIGIYFATWWGLNVIFNIYNKKVLNAYPYPWLTSTLSLAAGSLIMLVSWALRIAETPKTDLEFWKSLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSKFILGESFPPGVYLSLLPIIGGCGLAALTELNFNMIGFMGAMISNLAFVFRNIFSKKGM...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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