当前解析结果
SmilChr02G001267| 统一新 Gene ID | SmilChr02G001267 |
|---|---|
| 名称 | SmilChr02G001267 |
| 描述 | uncharacterized SmilChr02G001267 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 23223735 - 23224523 / - |
| NCBI Gene ID | LOC131008155 |
|---|---|
| GeneID | 131008155 |
| locus_tag | - |
| NCBI Name | LOC131008155 |
| 原始查询 | SmilChr02G001267 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008155 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057791032.1 |
| 2 | Cytoplasmic granule | 细胞质颗粒 | 1.00000 | XP_057791032.1 |
| 3 | Nucleus | 细胞核 | 0.60000 | XP_057791032.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.60000 | XP_057791032.1 |
| 5 | P-body | P-body | 0.20000 | XP_057791032.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:23223740 |
G |
A |
EMS_canonical_SNV | stop_gained | 96 | A11,A13,A14,A16,A2,A25,A4,A8,B1,B100,B102,B107,B110,B112,B115,B117,B118,B125,B126,B127,B128,B129,B130,B131,B132,B136,B16,B17,B19,B2,B20,B23,B28,B3,B30,B31,B39,B4,B43,B44,B45,B46,B49,B55,B58,B61,B62,B67,B68,B7,B73,B76,B77,B80,B81,B89,B90,B98,C13,C17,C19,C2,C27,C28,C3,C30,C34,C35,C41,C43,C44,C45,C46,C47,C48,C49,C58,C59,C6,C61,C7,C71,C72,C75,C78,C79,C80,C81,C82,C9,D1,D10,D3,D4,D6,D8 |
Chr2:23223741 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B13,C30,C54 |
Chr2:23223743 |
G |
A |
EMS_canonical_SNV | stop_gained | 28 | A10,A2,A20,B11,B125,B138,B140,B19,B27,B80,B81,B90,B92,B96,C11,C12,C15,C27,C35,C41,C49,C53,C56,C60,C61,D11,D3,D9 |
Chr2:23223749 |
G |
A |
EMS_canonical_SNV | stop_gained | 216 | A1,A10,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A6,A7,A9,B1,B10,B100,B101,B103,B104,B106,B107,B108,B109,B11,B111,B112,B115,B117,B119,B12,B120,B121,B122,B123,B124,B125,B126,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B14,B140,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B5,B50,B51,B52,B53,B54,B55,B56,B57,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B69,B7,B70,B71,B72,B73,B74,B77,B80,B81,B82,B83,B84,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C15,C16,C17,C18,C19,C21,C23,C24,C25,C26,C27,C28,C29,C30,C32,C33,C34,C35,C36,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C50,C52,C53,C54,C55,C56,C57,C58,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C72,C73,C75,C76,C77,C78,C8,C80,C81,C82,C83,C84,C85,C87,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9 |
Chr2:23223759 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B111,B117,B120,C23 |
Chr2:23223791 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A20,B97,C31,C80 |
Chr2:23223798 |
CGT |
C |
2bp_deletion | frameshift_variant | 170 | A1,A10,A14,A15,A16,A19,A2,A20,A22,A23,A24,A25,A3,A6,A7,A9,B1,B10,B100,B101,B103,B104,B106,B107,B108,B109,B111,B115,B117,B119,B12,B122,B123,B124,B126,B128,B129,B130,B131,B132,B133,B135,B136,B137,B138,B14,B140,B17,B18,B2,B20,B21,B22,B23,B24,B27,B28,B29,B30,B31,B32,B33,B34,B36,B4,B40,B41,B42,B43,B45,B46,B47,B48,B5,B51,B52,B53,B56,B57,B59,B6,B61,B63,B64,B66,B67,B69,B7,B70,B71,B72,B73,B74,B80,B81,B82,B90,B92,B93,B94,B95,B96,B97,B98,C1,C11,C12,C13,C15,C16,C18,C19,C2,C21,C23,C25,C26,C27,C28,C29,C30,C32,C33,C34,C35,C38,C39,C4,C41,C43,C44,C46,C47,C49,C52,C53,C54,C56,C57,C58,C6,C61,C62,C63,C64,C65,C66,C67,C68,C7,C70,C71,C73,C75,C76,C78,C8,C80,C81,C82,C83,C84,C87,D10,D2,D3,D4,D6,D7,D9 |
Chr2:23223802 |
A |
AAG |
2bp_insertion | frameshift_variant | 135 | A10,A14,A15,A16,A19,A20,A22,A23,A25,A3,A6,A7,A9,B1,B10,B100,B101,B103,B104,B106,B108,B109,B111,B117,B119,B12,B123,B130,B131,B133,B135,B136,B137,B138,B14,B140,B18,B20,B21,B22,B23,B24,B27,B28,B29,B30,B31,B32,B33,B34,B36,B40,B41,B42,B46,B47,B48,B5,B51,B52,B53,B56,B57,B59,B6,B61,B63,B64,B66,B69,B71,B72,B73,B74,B80,B82,B90,B92,B93,B94,B95,B97,B98,C1,C11,C12,C13,C18,C19,C2,C21,C23,C25,C27,C28,C29,C30,C32,C33,C34,C35,C39,C4,C44,C46,C47,C51,C52,C53,C54,C56,C57,C58,C61,C62,C63,C64,C65,C66,C68,C7,C70,C71,C73,C76,C78,C8,C81,C82,C83,C84,D10,D2,D3,D9 |
Chr2:23223848 |
G |
A |
EMS_canonical_SNV | stop_gained | 4 | B12,B126,C3,C41 |
Chr2:23223848 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B12,B126,C3,C41 |
Chr2:23223853 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B35,B65,B69 |
Chr2:23223875 |
G |
A |
EMS_canonical_SNV | stop_gained | 20 | A10,A11,A14,B112,B114,B119,B122,B123,B129,B134,B139,B2,B78,B79,B86,C38,C39,C4,C52,D7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。