当前解析结果
SmilChr02G001270| 统一新 Gene ID | SmilChr02G001270 |
|---|---|
| 名称 | SmilChr02G001270 |
| 描述 | uncharacterized SmilChr02G001270 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 23248477 - 23257609 / - |
| NCBI Gene ID | LOC131008361 |
|---|---|
| GeneID | 131008361 |
| locus_tag | - |
| NCBI Name | LOC131008361 |
| 原始查询 | SmilChr02G001270 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | amino-terminal region of chorein [Source:NCBI gene (formerly Entrezgene);Acc:821620]; symbol=AT3G20720; hit=AT3G20720; species=arabidopsis; confidence=high |
| 产物 | amino-terminal region of chorein [Source:NCBI gene (formerly Entrezgene);Acc:821620]; symbol=AT3G20720; hit=AT3G20720; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G20720 (AT3G20720)amino-terminal region of chorein [Source:NCBI gene (formerly Entrezgene);Acc:821620] identity=59.7; qcov=0.997; evalue=0; confidence=high |
| Rice | Os04g0628600- identity=53.6; qcov=1; evalue=0; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008361 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.80000 | XP_057791227.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.60000 | XP_057791227.1 |
| 3 | Nucleus membrane | 核膜 | 0.40000 | XP_057791227.1 |
| 4 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057791228.1 |
| 5 | Cytoplasmic vesicle | 细胞质囊泡 | 0.20000 | XP_057791229.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:23248786 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C20 |
Chr2:23248812 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B19,B77 |
Chr2:23248879 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B107 |
Chr2:23249231 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr2:23249450 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B107 |
Chr2:23250449 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B126 |
Chr2:23250458 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B60 |
Chr2:23251005 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A22,B37,B6,C63 |
Chr2:23251036 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B13,C12,C30 |
Chr2:23251085 |
TC |
T |
1bp_deletion | frameshift_variant | 1 | B136 |
Chr2:23251085 |
TC |
T |
1bp_deletion | CDS_variant | 1 | B136 |
Chr2:23252400 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。