Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G001314`

染色体: Chr02 坐标: 24437945-24442771 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G001314`
名称	SmilChr02G001314
描述	calcium/calmodulin-regulated receptor-like kinase 1
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	24437945 - 24442771 / `-`

ID 对照

NCBI Gene ID	`LOC131007793`
GeneID	`131007793`
locus_tag	`-`
NCBI Name	`LOC131007793`
原始查询	`SmilChr02G001314`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	calcium/calmodulin-regulated receptor-like kinase 1
产物	calcium/calmodulin-regulated receptor-like kinase 1
Arabidopsis	`AT5G54590` (CRLK1) Protein kinase superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:835548] identity=76.2; qcov=0.906; evalue=0; confidence=high
Rice	`Os08g0138700` (OsRLCK245) - identity=64.3; qcov=1.01; evalue=0; confidence=high
GO	GO:0004672 (protein kinase activity); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation)
KEGG	-
Pfam	PF00069 (Pkinase); PF07714 (PK_Tyr_Ser-Thr)
InterPro	-
eggNOG	-
NR	GeneID:131007793

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057790693.1`
2	Nucleus	细胞核	0.00000	`XP_057790693.1`
3	Chromosome	染色体	0.00000	`XP_057790693.1`
4	Centromere	着丝粒	0.00000	`XP_057790693.1`
5	Chromatin	染色质	0.00000	`XP_057790693.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:24438244`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	A13,B101
`Chr2:24439414`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C3,C48
`Chr2:24440167`	`CT`	`C`	1bp_deletion	frameshift_variant	1	B106
`Chr2:24440169`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B106
`Chr2:24440182`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C56
`Chr2:24440208`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B14
`Chr2:24440237`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C31

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057790693.1

427 aa

214

427

PK_Tyr_Ser-Thr

Pkinase

PF07714 PK_Tyr_Ser-Thr 114-375 aa PF00069 Pkinase 116-373 aa

XP_057790694.1

427 aa

214

427

PK_Tyr_Ser-Thr

Pkinase

PF07714 PK_Tyr_Ser-Thr 114-375 aa PF00069 Pkinase 116-373 aa

XP_057790695.1

427 aa

214

427

PK_Tyr_Ser-Thr

Pkinase

PF07714 PK_Tyr_Ser-Thr 114-375 aa PF00069 Pkinase 116-373 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057790693.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	114	375	1.3e-50	172.9	Protein tyrosine and serine/threonine kinase
`XP_057790693.1`	Pfam	`PF00069`	Pkinase	Domain	116	373	2.5e-48	165.5	Protein kinase domain
`XP_057790694.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	114	375	1.3e-50	172.9	Protein tyrosine and serine/threonine kinase
`XP_057790694.1`	Pfam	`PF00069`	Pkinase	Domain	116	373	2.5e-48	165.5	Protein kinase domain
`XP_057790695.1`	Pfam	`PF07714`	PK_Tyr_Ser-Thr	Domain	114	375	1.3e-50	172.9	Protein tyrosine and serine/threonine kinase
`XP_057790695.1`	Pfam	`PF00069`	Pkinase	Domain	116	373	2.5e-48	165.5	Protein kinase domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057934710.1
GGCAATATAAAATACTCAAAGCGATGGATGAAACATAAAATAAATTTGTTCCCTCAAAAACAAAAAACAAAAAAATTAAACAGAAAAGGGCAATTTGGGAAATCAAATAATGCAGAGTGCTAGCATTTCCCGGCTGTCCGGTGCGAGCCGAACCAATTTGAATTATGTAATGAAAAGAAAACAACTCCTCTCTCTCTCTCTCTCATCGGCATCGTGCACTGCTCCTTTCTTGACCAGTTGCCACTGTTTCTTCTTCGCCC...

XM_057934711.1
AAAATTGACTTCTACTGTTTTGGAAACTAATGAAAATTTGTTGACGTTACATGGACGGATTAGATAATAGGGTGGATTTGTAAAGAAAGAGATGGAAGGGGAATCATCAGGCTTAATTATCGGGCTGTCGATTGGAGTGGTGATCGGAGTGGTTTTGGCTATAACTGCATTTTTTTGCTTCAAGTATCAAAGGAAGAGTACCCAAATAGGGAATAGCAGTTCTAGGAGGAATGCAACCATACCTATACGTACAAATGGGG...

CDS

3 records

下载 CDS FASTA

LOC131007793
ATGGAAGGGGAATCATCAGGCTTAATTATCGGGCTGTCGATTGGAGTGGTGATCGGAGTGGTTTTGGCTATAACTGCATTTTTTTGCTTCAAGTATCAAAGGAAGAGTACCCAAATAGGGAATAGCAGTTCTAGGAGGAATGCAACCATACCTATACGTACAAATGGGGTTGATTCTTGTACAATATTATCGGATTCATCGCTTGGCACTGAATCGCCAAAGTCGGTGATGCAGACTAGTTTGCCGTTGTGGCTTAGGGG...

Protein

3 records

下载 Protein FASTA

XP_057790693.1
MEGESSGLIIGLSIGVVIGVVLAITAFFCFKYQRKSTQIGNSSSRRNATIPIRTNGVDSCTILSDSSLGTESPKSVMQTSLPLWLRGLKKVNLVSASGILEYSYKDLQKATCNFTTLIGKGAYGPVYKAQMSSEETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKNQHMLIYVYMSRGSLASHLYNEILEPLSWELRLQIALDVARGLEYLHDGAVPSVIHRDIKSSNILLDHSMRARVADFGLSRE...

XP_057790694.1
MEGESSGLIIGLSIGVVIGVVLAITAFFCFKYQRKSTQIGNSSSRRNATIPIRTNGVDSCTILSDSSLGTESPKSVMQTSLPLWLRGLKKVNLVSASGILEYSYKDLQKATCNFTTLIGKGAYGPVYKAQMSSEETVAVKVLATDSKQGEKEFQTEVMLLGRLHHRNLVNLVGYCAEKNQHMLIYVYMSRGSLASHLYNEILEPLSWELRLQIALDVARGLEYLHDGAVPSVIHRDIKSSNILLDHSMRARVADFGLSRE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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