Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G001384`

染色体: Chr02 坐标: 26346750-26349169 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G001384`
名称	SmilChr02G001384
描述	transcription factor bHLH123-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	26346750 - 26349169 / `+`

ID 对照

NCBI Gene ID	`LOC131007623`
GeneID	`131007623`
locus_tag	`-`
NCBI Name	`LOC131007623`
原始查询	`SmilChr02G001384`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog
描述	transcription factor bHLH123-like
产物	transcription factor bHLH123-like
Arabidopsis	`AT3G20640` (AT3G20640) basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:821611] identity=46.3; qcov=0.919; evalue=2.74e-79; confidence=high
Rice	`Os04g0631600` (OsbHLH068) - identity=51.7; qcov=0.452; evalue=5.45e-50; confidence=medium
GO	GO:0000978 (RNA polymerase II cis-regulatory region sequence-specific DNA binding); GO:0000981 (DNA-binding transcription factor activity, RNA polymerase II-specific); GO:0005634 (nucleus); GO:0006357 (regulation of transcription by RNA polymerase II); GO:0046983 (protein dimerization activity)
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131007623

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057790507.1`
2	Chromosome	染色体	0.00000	`XP_057790507.1`
3	Centromere	着丝粒	0.00000	`XP_057790507.1`
4	Chromatin	染色质	0.00000	`XP_057790507.1`
5	Telomere	端粒	0.00000	`XP_057790507.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:26347001`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C10
`Chr2:26347130`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	A20,B33,B79,C82
`Chr2:26347169`	`TGG`	`T`	2bp_deletion	frameshift_variant	1	C36
`Chr2:26347169`	`TGG`	`T`	2bp_deletion	CDS_variant	1	C36
`Chr2:26347250`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B37
`Chr2:26347643`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C49
`Chr2:26347779`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B100,B77
`Chr2:26347833`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B94,C71
`Chr2:26348758`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A13,C10

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057934525.1
GATGCAGGCATCCCGGTTTCATTTCGGTTTTTATAAAAATCAGCCAAAAAGTAAAAGGAGCCAAAAGAGTCTTCAAGCATAAGCGTCTCAACATTTATTTTGCCTTTTTCGTTGGAAAAAATAAAATAAAATAAAAATAAAAATCAAAGGGCGAAGCAGGCAGCCATGGCAGACGAATTCCAGCTAGGAAACGGAAGCTGGTGGGATACAACAAGAAACAGATTCGAAAGCGGCACGTCACCGGCATCGTCGTCGATTTC...

XM_057934524.1
TGCAGGCATCCCGGTTTCATTTCGGTTTTTATAAAAATCAGCCAAAAAGTAAAAGGAGCCAAAAGAGTCTTCAAGCATAAGCGTCTCAACATTTATTTTGCCTTTTTCGTTGGAAAAAATAAAATAAAATAAAAATAAAAATCAAAGGGCGAAGCAGGCAGCCATGGCAGACGAATTCCAGCTAGGAAACGGAAGCTGGTGGGATACAACAAGAAACAGATTCGAAAGCGGCACGTCACCGGCATCGTCGTCGATTTCCA...

CDS

2 records

下载 CDS FASTA

LOC131007623
ATGGCAGACGAATTCCAGCTAGGAAACGGAAGCTGGTGGGATACAACAAGAAACAGATTCGAAAGCGGCACGTCACCGGCATCGTCGTCGATTTCCACAACGTTGAATGCTATCGCAAGCTTCGGATGGTCGACGGAGATGGTGGACATGAAATCATCAAGGTCTACAATGGAATCCGCCACCGCGTCCACGGCCGCCACTATGGTGTGCCATGACGATCAATCGTCTGCTGGCGGCGGCGGTGGAGGTGGAGGTGGAGG...

Protein

2 records

下载 Protein FASTA

XP_057790507.1
MADEFQLGNGSWWDTTRNRFESGTSPASSSISTTLNAIASFGWSTEMVDMKSSRSTMESATASTAATMVCHDDQSSAGGGGGGGGGGGGGVLSTPSLQMMGLGLSSQSMDWNQALFRNEKGESSFRSLLQEDLSSNNGSFQPESAASSQEQWRQKLFSGASSENEFKQINRGFSLDQPQFSSQASSNDSTITSQSLTTAFQVDSAAAYGLLLSENQQHSNYQNRAISNYPYPPAAGGYGGNAAEMIPSMNKYPPFLRTSP...

XP_057790508.1
MADEFQLGNGSWWDTTRNRFESGTSPASSSISTTLNAIASFGWSTEMVDMKSSRSTMESATASTAATMVCHDDQSSAGGGGGGGGGGGGGVLSTPSLQMMGLGLSSQSMDWNQALLNEKGESSFRSLLQEDLSSNNGSFQPESAASSQEQWRQKLFSGASSENEFKQINRGFSLDQPQFSSQASSNDSTITSQSLTTAFQVDSAAAYGLLLSENQQHSNYQNRAISNYPYPPAAGGYGGNAAEMIPSMNKYPPFLRTSPP...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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