当前解析结果
SmilChr02G001595| 统一新 Gene ID | SmilChr02G001595 |
|---|---|
| 名称 | SmilChr02G001595 |
| 描述 | uncharacterized SmilChr02G001595 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 29768588 - 29770684 / - |
| NCBI Gene ID | LOC131008258 |
|---|---|
| GeneID | 131008258 |
| locus_tag | - |
| NCBI Name | LOC131008258 |
| 原始查询 | SmilChr02G001595 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | hit=Os12g0292200; species=rice; confidence=weak |
| 产物 | hit=Os12g0292200; species=rice; confidence=weak |
| Arabidopsis | -- |
| Rice | Os12g0292200- identity=39.3; qcov=0.228; evalue=6.83e-10; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008258 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057791130.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057791130.1 |
| 3 | Cytosol | 细胞质基质 | 0.60000 | XP_057791130.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057791130.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057791130.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:29768653 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr2:29769070 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A22,B133,B89,C26 |
Chr2:29769101 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B91 |
Chr2:29769121 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B133,B89 |
Chr2:29770404 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B47 |
Chr2:29770407 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B98 |
Chr2:29770424 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B137,B87,C54 |
Chr2:29770428 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A11,C29 |
Chr2:29770457 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C19,C64 |
Chr2:29770463 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C19,C64 |
Chr2:29770502 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A20 |
Chr2:29770510 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A20 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。