当前解析结果
SmilChr02G001657| 统一新 Gene ID | SmilChr02G001657 |
|---|---|
| 名称 | SmilChr02G001657 |
| 描述 | uncharacterized SmilChr02G001657 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 30763819 - 30765136 / + |
| NCBI Gene ID | LOC131008277 |
|---|---|
| GeneID | 131008277 |
| locus_tag | - |
| NCBI Name | LOC131008277 |
| 原始查询 | SmilChr02G001657 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=29.5; qcov=0.367; evalue=2.06e-18; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008277 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057791147.1 |
| 2 | Nucleus | 细胞核 | 0.40000 | XP_057791147.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.40000 | XP_057791147.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057791147.1 |
| 5 | Cytosol | 细胞质基质 | 0.20000 | XP_057791147.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:30763824 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C79 |
Chr2:30763826 |
AG |
A |
1bp_deletion | frameshift_variant | 1 | B104 |
Chr2:30763826 |
AG |
A |
1bp_deletion | CDS_variant | 1 | B104 |
Chr2:30763827 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B46,B98,C80 |
Chr2:30763838 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C51,C74,D10 |
Chr2:30763839 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B135,B98 |
Chr2:30763901 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B139,B46 |
Chr2:30763924 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr2:30763942 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B18,B99,C72 |
Chr2:30763956 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr2:30763962 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr2:30763972 |
C |
T |
EMS_canonical_SNV | stop_gained | 1 | C38 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。