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调控/突变
TF 结合位点 TF 靶基因 EMS 突变
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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr02G001738

染色体: Chr02 坐标: 31948445-31952967 链方向: + 类型: protein_coding

基本信息

统一新 Gene IDSmilChr02G001738
名称SmilChr02G001738
描述phytosulfokine receptor 2
染色体 / SeqIDChr02 / NC_080388.1
坐标与链方向31948445 - 31952967 / +

ID 对照

NCBI Gene IDLOC131013361
GeneID131013361
locus_tag-
NCBI NameLOC131013361
原始查询SmilChr02G001738

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述phytosulfokine receptor 2
产物phytosulfokine receptor 2
ArabidopsisAT5G53890 (PSKR2)
phytosylfokine-alpha receptor 2 [Source:NCBI gene (formerly Entrezgene);Acc:835470]
identity=63.5; qcov=1; evalue=0; confidence=high
RiceOs07g0107800
-
identity=56.1; qcov=0.981; evalue=0; confidence=high
GOGO:0004672 (protein kinase activity); GO:0005515 (protein binding); GO:0005524 (ATP binding); GO:0006468 (protein phosphorylation)
KEGGsmil04075 (Plant hormone signal transduction - Salvia miltiorrhiza (redroot sage))
PfamPF00069 (Pkinase); PF00560 (LRR_1); PF07714 (PK_Tyr_Ser-Thr); PF08263 (LRRNT_2); PF13855 (LRR_8)
InterPro-
eggNOG-
NRGeneID:131013361

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Cell membrane 细胞膜 1.00000 XP_057797406.1
2 Nucleus 细胞核 0.00000 XP_057797406.1
3 Chromosome 染色体 0.00000 XP_057797406.1
4 Centromere 着丝粒 0.00000 XP_057797406.1
5 Chromatin 染色质 0.00000 XP_057797406.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr2:31950011 G A EMS_canonical_SNV CDS_variant 2 A7,C81
Chr2:31950079 G A EMS_canonical_SNV CDS_variant 2 A7,C81
Chr2:31950380 G A EMS_canonical_SNV CDS_variant 1 B35
Chr2:31950385 C T EMS_canonical_SNV CDS_variant 1 B104
Chr2:31950439 C T EMS_canonical_SNV CDS_variant 1 C74
Chr2:31950664 G A EMS_canonical_SNV CDS_variant 1 B53
Chr2:31950789 G A EMS_canonical_SNV CDS_variant 1 B110
Chr2:31951085 C T EMS_canonical_SNV CDS_variant 1 C81
Chr2:31951210 G A EMS_canonical_SNV CDS_variant 1 B35
Chr2:31951253 C T EMS_canonical_SNV CDS_variant 4 A9,B103,B84,C1
Chr2:31951287 C T EMS_canonical_SNV CDS_variant 5 B124,B2,C48,C62,C78
Chr2:31951383 C T EMS_canonical_SNV CDS_variant 1 C87

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057797406.1
1042 aa
N
1
521
1042
LRRNT_2
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 31-67 aa PF00560 LRR_1 102-124 aa PF13855 LRR_8 102-161 aa PF00560 LRR_1 222-243 aa PF00560 LRR_1 245-267 aa PF00560 LRR_1 269-291 aa PF00560 LRR_1 341-363 aa PF13855 LRR_8 341-400 aa PF00560 LRR_1 366-387 aa PF00560 LRR_1 463-484 aa PF00560 LRR_1 487-508 aa PF13855 LRR_8 573-632 aa PF00560 LRR_1 574-595 aa PF00560 LRR_1 597-619 aa PF00069 Pkinase 766-1031 aa PF07714 PK_Tyr_Ser-Thr 768-1033 aa
XP_057797407.1
1042 aa
N
1
521
1042
LRRNT_2
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 31-67 aa PF00560 LRR_1 102-124 aa PF13855 LRR_8 102-161 aa PF00560 LRR_1 222-243 aa PF00560 LRR_1 245-267 aa PF00560 LRR_1 269-291 aa PF00560 LRR_1 341-363 aa PF13855 LRR_8 341-400 aa PF00560 LRR_1 366-387 aa PF00560 LRR_1 463-484 aa PF00560 LRR_1 487-508 aa PF13855 LRR_8 573-632 aa PF00560 LRR_1 574-595 aa PF00560 LRR_1 597-619 aa PF00069 Pkinase 766-1031 aa PF07714 PK_Tyr_Ser-Thr 768-1033 aa
XP_057797408.1
1042 aa
N
1
521
1042
LRRNT_2
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 31-67 aa PF00560 LRR_1 102-124 aa PF13855 LRR_8 102-161 aa PF00560 LRR_1 222-243 aa PF00560 LRR_1 245-267 aa PF00560 LRR_1 269-291 aa PF00560 LRR_1 341-363 aa PF13855 LRR_8 341-400 aa PF00560 LRR_1 366-387 aa PF00560 LRR_1 463-484 aa PF00560 LRR_1 487-508 aa PF13855 LRR_8 573-632 aa PF00560 LRR_1 574-595 aa PF00560 LRR_1 597-619 aa PF00069 Pkinase 766-1031 aa PF07714 PK_Tyr_Ser-Thr 768-1033 aa
XP_057797409.1
1042 aa
N
1
521
1042
LRRNT_2
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
LRR_1
LRR_8
LRR_1
LRR_1
Pkinase
PK_Tyr_Ser-Thr
C
PF08263 LRRNT_2 31-67 aa PF00560 LRR_1 102-124 aa PF13855 LRR_8 102-161 aa PF00560 LRR_1 222-243 aa PF00560 LRR_1 245-267 aa PF00560 LRR_1 269-291 aa PF00560 LRR_1 341-363 aa PF13855 LRR_8 341-400 aa PF00560 LRR_1 366-387 aa PF00560 LRR_1 463-484 aa PF00560 LRR_1 487-508 aa PF13855 LRR_8 573-632 aa PF00560 LRR_1 574-595 aa PF00560 LRR_1 597-619 aa PF00069 Pkinase 766-1031 aa PF07714 PK_Tyr_Ser-Thr 768-1033 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057797406.1 Pfam PF08263 LRRNT_2 Family 31 67 8.2e-07 29.9 Leucine rich repeat N-terminal domain
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 102 124 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF13855 LRR_8 Repeat 102 161 1e-38 131.6 Leucine rich repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 222 243 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 245 267 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 269 291 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 341 363 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF13855 LRR_8 Repeat 341 400 1e-38 131.6 Leucine rich repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 366 387 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 463 484 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 487 508 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF13855 LRR_8 Repeat 573 632 1e-38 131.6 Leucine rich repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 574 595 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF00560 LRR_1 Repeat 597 619 1.4e-43 138.2 Leucine Rich Repeat
XP_057797406.1 Pfam PF00069 Pkinase Domain 766 1031 6.1e-44 151.1 Protein kinase domain
XP_057797406.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 768 1033 7.8e-44 150.6 Protein tyrosine and serine/threonine kinase
XP_057797407.1 Pfam PF08263 LRRNT_2 Family 31 67 8.2e-07 29.9 Leucine rich repeat N-terminal domain
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 102 124 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF13855 LRR_8 Repeat 102 161 1e-38 131.6 Leucine rich repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 222 243 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 245 267 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 269 291 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 341 363 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF13855 LRR_8 Repeat 341 400 1e-38 131.6 Leucine rich repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 366 387 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 463 484 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 487 508 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF13855 LRR_8 Repeat 573 632 1e-38 131.6 Leucine rich repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 574 595 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF00560 LRR_1 Repeat 597 619 1.4e-43 138.2 Leucine Rich Repeat
XP_057797407.1 Pfam PF00069 Pkinase Domain 766 1031 6.1e-44 151.1 Protein kinase domain
XP_057797407.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 768 1033 7.8e-44 150.6 Protein tyrosine and serine/threonine kinase
XP_057797408.1 Pfam PF08263 LRRNT_2 Family 31 67 8.2e-07 29.9 Leucine rich repeat N-terminal domain
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 102 124 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF13855 LRR_8 Repeat 102 161 1e-38 131.6 Leucine rich repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 222 243 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 245 267 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 269 291 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 341 363 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF13855 LRR_8 Repeat 341 400 1e-38 131.6 Leucine rich repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 366 387 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 463 484 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 487 508 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF13855 LRR_8 Repeat 573 632 1e-38 131.6 Leucine rich repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 574 595 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF00560 LRR_1 Repeat 597 619 1.4e-43 138.2 Leucine Rich Repeat
XP_057797408.1 Pfam PF00069 Pkinase Domain 766 1031 6.1e-44 151.1 Protein kinase domain
XP_057797408.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 768 1033 7.8e-44 150.6 Protein tyrosine and serine/threonine kinase
XP_057797409.1 Pfam PF08263 LRRNT_2 Family 31 67 8.2e-07 29.9 Leucine rich repeat N-terminal domain
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 102 124 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF13855 LRR_8 Repeat 102 161 1e-38 131.6 Leucine rich repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 222 243 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 245 267 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 269 291 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 341 363 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF13855 LRR_8 Repeat 341 400 1e-38 131.6 Leucine rich repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 366 387 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 463 484 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 487 508 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF13855 LRR_8 Repeat 573 632 1e-38 131.6 Leucine rich repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 574 595 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF00560 LRR_1 Repeat 597 619 1.4e-43 138.2 Leucine Rich Repeat
XP_057797409.1 Pfam PF00069 Pkinase Domain 766 1031 6.1e-44 151.1 Protein kinase domain
XP_057797409.1 Pfam PF07714 PK_Tyr_Ser-Thr Domain 768 1033 7.8e-44 150.6 Protein tyrosine and serine/threonine kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA
XM_057941426.1
GGGGCACCAAATTAATGTCGCAAAGCCTTGCTAAACTCTCCACTTTCCCACTGAAAAACACATCTTCTACTGACAGGGAGAGAGAGAGAGAAAGAGACAAACTTGGGTATTGACAATTGAGTCAGAGTTAGTATGATGGCAAAATATAACTGTGACAATAGATAACTCCAAACAAAATTTATGGTGCACAATATTCAAATATAACTCTCAACGCAAAAAGTCAGCTCTTTGTGTCATCATTTCAAACCAATCCCACCAGT...
XM_057941423.1
GCACAATATTCAAATATAACTCTCAACGCAAAAAGTCAGCTCTTTGTGTCATCATTTCAAACCAATCCCACCAGTCTATTTTGTCTGTCAGACAATAATAATAAAATTGCATTTGTTGAACAAAATCAAAATTCAGTGAGCAGCTCCGAGTTGTAAAAAACACTTTCCCCTTTTTTCATGTCGTGTACAAGAATGGTCTTTTTTCTCTTCTACTACTATCTTTGATTTGAAATCACTGGATTTTGACAGTGTGAAACCAT...

CDS

4 records

下载 CDS FASTA
LOC131013361
ATGGTGATCATGAATATCCTGAATTTGGCGTTCTTTGCTGGTTTCCTCTGTTTATCCTTGAGCATTGCAGCTCCTGCACACGGCTGTGATCCAAATGATTTGTCGGCCTTGAAGGAGTTTGCCGGCCAACTGATCAATGGCTCGGTTAAAGTTTCTTGGTCTAATGATCAAAACTGTTGCAGATGGGAAGGTGTTGTCTGTGAAGATGGTAGGAGTAAGGCGGGGGCGCATAGAGTGATCATGTTGCAGTTATCTCAAAA...
LOC131013361
ATGGTGATCATGAATATCCTGAATTTGGCGTTCTTTGCTGGTTTCCTCTGTTTATCCTTGAGCATTGCAGCTCCTGCACACGGCTGTGATCCAAATGATTTGTCGGCCTTGAAGGAGTTTGCCGGCCAACTGATCAATGGCTCGGTTAAAGTTTCTTGGTCTAATGATCAAAACTGTTGCAGATGGGAAGGTGTTGTCTGTGAAGATGGTAGGAGTAAGGCGGGGGCGCATAGAGTGATCATGTTGCAGTTATCTCAAAA...

Protein

4 records

下载 Protein FASTA
XP_057797406.1
MVIMNILNLAFFAGFLCLSLSIAAPAHGCDPNDLSALKEFAGQLINGSVKVSWSNDQNCCRWEGVVCEDGRSKAGAHRVIMLQLSQKGLKGNISVSLGRLDRLKVLDLSHNSLEDGLPLELSNLQGLEVLDLSHNMLVGAPFGAIAGLKSVQSVNLSSNSLSGNLTDIGVFPNLVALNMSSNLFTGQISSKICNFSKSSRVVDLSSNHLTGGLEGLTGCKALQQLHIYSNSLSGDLPDSLYSLSSLQQLSISSNSLSGQL...
XP_057797407.1
MVIMNILNLAFFAGFLCLSLSIAAPAHGCDPNDLSALKEFAGQLINGSVKVSWSNDQNCCRWEGVVCEDGRSKAGAHRVIMLQLSQKGLKGNISVSLGRLDRLKVLDLSHNSLEDGLPLELSNLQGLEVLDLSHNMLVGAPFGAIAGLKSVQSVNLSSNSLSGNLTDIGVFPNLVALNMSSNLFTGQISSKICNFSKSSRVVDLSSNHLTGGLEGLTGCKALQQLHIYSNSLSGDLPDSLYSLSSLQQLSISSNSLSGQL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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