当前解析结果
SmilChr02G001992| 统一新 Gene ID | SmilChr02G001992 |
|---|---|
| 名称 | SmilChr02G001992 |
| 描述 | uncharacterized SmilChr02G001992 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 36008309 - 36009969 / - |
| NCBI Gene ID | LOC131012205 |
|---|---|
| GeneID | 131012205 |
| locus_tag | - |
| NCBI Name | LOC131012205 |
| 原始查询 | SmilChr02G001992 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | myosin-G heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818899]; symbol=AT2G42975; hit=AT2G42975; species=arabidopsis; confidence=high |
| 产物 | myosin-G heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818899]; symbol=AT2G42975; hit=AT2G42975; species=arabidopsis; confidence=high |
| Arabidopsis | AT2G42975 (AT2G42975)myosin-G heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:818899] identity=77.1; qcov=0.645; evalue=2.96e-57; confidence=high |
| Rice | Os01g0666600- identity=54.8; qcov=0.738; evalue=5.93e-36; confidence=medium |
| GO | GO:0009507 (chloroplast) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012205 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057796094.1 |
| 2 | Chloroplast thylakoid | 类囊体 | 1.00000 | XP_057796094.1 |
| 3 | Chloroplast thylakoid membrane | 类囊体膜 | 1.00000 | XP_057796094.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057796094.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057796094.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:36008466 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B45 |
Chr2:36008508 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B94,C1,C59 |
Chr2:36008632 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr2:36008670 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B120,B37 |
Chr2:36008736 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C77 |
Chr2:36009637 |
CT |
C |
1bp_deletion | frameshift_variant | 1 | C79 |
Chr2:36009637 |
CT |
C |
1bp_deletion | CDS_variant | 1 | C79 |
Chr2:36009652 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。