Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002005`

染色体: Chr02 坐标: 36188049-36191837 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002005`
名称	SmilChr02G002005
描述	uncharacterized SmilChr02G002005
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	36188049 - 36191837 / `-`

ID 对照

NCBI Gene ID	`LOC131012218`
GeneID	`131012218`
locus_tag	`-`
NCBI Name	`LOC131012218`
原始查询	`SmilChr02G002005`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Magnesium transporter CorA-like family protein [Source:NCBI gene (formerly Entrezgene);Acc:839860]; symbol=AT1G29820; hit=AT1G29820; species=arabidopsis; confidence=high
产物	Magnesium transporter CorA-like family protein [Source:NCBI gene (formerly Entrezgene);Acc:839860]; symbol=AT1G29820; hit=AT1G29820; species=arabidopsis; confidence=high
Arabidopsis	`AT1G29820` (AT1G29820) Magnesium transporter CorA-like family protein [Source:NCBI gene (formerly Entrezgene);Acc:839860] identity=63.6; qcov=0.979; evalue=0; confidence=high
Rice	`Os01g0664100` - identity=62.2; qcov=0.953; evalue=0; confidence=high
GO	GO:0016020 (membrane); GO:0030001 (metal ion transport); GO:0046873 (metal ion transmembrane transporter activity); GO:0055085 (transmembrane transport)
KEGG	-
Pfam	PF01544 (CorA)
InterPro	-
eggNOG	-
NR	GeneID:131012218

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	0.40000	`XP_057796104.1`
2	Mitochondrion	线粒体	0.20000	`XP_057796104.1`
3	Endoplasmic reticulum	内质网	0.20000	`XP_057796104.1`
4	Endoplasmic reticulum membrane	内质网膜	0.20000	`XP_057796104.1`
5	Chloroplast membrane	叶绿体膜	0.20000	`XP_057796104.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:36188196`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:36188217`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B14,B20,B98,C38,C79
`Chr2:36188331`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B50,C86
`Chr2:36188366`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C31
`Chr2:36188371`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B125,C46
`Chr2:36188439`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	A23
`Chr2:36188527`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B65,B80,C41,C61
`Chr2:36188530`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	A23
`Chr2:36188533`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B59
`Chr2:36188789`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B129,B30,C37
`Chr2:36188836`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B82
`Chr2:36188873`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B75,C43

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796104.1

528 aa

264

528

CorA

PF01544 CorA 328-463 aa

XP_057796105.1

528 aa

264

528

CorA

PF01544 CorA 328-463 aa

XP_057796106.1

528 aa

264

528

CorA

PF01544 CorA 328-463 aa

XP_057796107.1

528 aa

264

528

CorA

PF01544 CorA 328-463 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796104.1`	Pfam	`PF01544`	CorA	Family	328	463	1.9e-09	38.0	CorA-like Mg2+ transporter protein
`XP_057796105.1`	Pfam	`PF01544`	CorA	Family	328	463	1.9e-09	38.0	CorA-like Mg2+ transporter protein
`XP_057796106.1`	Pfam	`PF01544`	CorA	Family	328	463	1.9e-09	38.0	CorA-like Mg2+ transporter protein
`XP_057796107.1`	Pfam	`PF01544`	CorA	Family	328	463	1.9e-09	38.0	CorA-like Mg2+ transporter protein

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XM_057940121.1
ACTGATATTATCTTGGTGAGGGCCATGAGGCACAATCCTAACCCTTGAGAATCAATTGTGATCTCGAATACTCCAAGGAATAACTACCTTACCCACTTCCAAATTCCCAAACATAAGCATTACATCACAATAATTGCCAAAAAACACAAAATTCGTATGAAAGATTACTGATTTCTTCAACAAATTCCTCCAATTTCTGGTGAACTCTCCATCCCCATTTCTTGAGCTATACAAAACAAGATACAGTTTATATCCGAAAA...

XM_057940122.1
TATTATCTTGGTGAGGGCCATGAGGCACAATCCTAACCCTTGAGAATCAATTGTGATCTCGAATACTCCAAGGAATAACTACCTTACCCACTTCCAAATTCCCAAACATAAGCATTACATCACAATAATTGCCAAAAAACACAAAATTCGTATGAAAGATTACTGATTTCTTCAACAAATTCCTCCAATTTCTGGTGAACTCTCCATCCCCATTTCTTGAGCTATACAAAACAAGATACAGTTTATATCCGAAAAAAGAA...

CDS

4 records

下载 CDS FASTA

LOC131012218
ATGAGCAATGATCAGAAGAAACAAGAAAGTCACAAACAGCTGTCGTGTAGGGATGTTACGTTGGGTGATGACTTATGGACGGATGGGCTAATATGTGCTTTTGAATTTGTTCGAGGTAATAGAAAACCTCATTATTCGGGGACCGGCTTGAAAGTTGAGTCTGCGCACACTAGTGCCGTAGAGAAGTCACAGAATGGAGATTTGGAAGCTTATGATGTTGACACTCTAGACGGGCAATCCCAGAGCTACAAGCATCATCT...

Protein

4 records

下载 Protein FASTA

XP_057796104.1
MSNDQKKQESHKQLSCRDVTLGDDLWTDGLICAFEFVRGNRKPHYSGTGLKVESAHTSAVEKSQNGDLEAYDVDTLDGQSQSYKHHLGCSHPRERSLGNYWIPIGWNRISQLVQMVQVDAVWASQFVELDDEDGVAVADVAAPYWERPVGPTWWCHVDAGSPFISSWLSNAEWLHPAISTALRDESKLISERMKHLLYEVPVRVAGGLLFELLGQSVGDPYAEEDDIPVVMRSWQAQNFLLTALHVKGSSSNINVLGVSE...

XP_057796105.1
MSNDQKKQESHKQLSCRDVTLGDDLWTDGLICAFEFVRGNRKPHYSGTGLKVESAHTSAVEKSQNGDLEAYDVDTLDGQSQSYKHHLGCSHPRERSLGNYWIPIGWNRISQLVQMVQVDAVWASQFVELDDEDGVAVADVAAPYWERPVGPTWWCHVDAGSPFISSWLSNAEWLHPAISTALRDESKLISERMKHLLYEVPVRVAGGLLFELLGQSVGDPYAEEDDIPVVMRSWQAQNFLLTALHVKGSSSNINVLGVSE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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