当前解析结果
SmilChr02G002024| 统一新 Gene ID | SmilChr02G002024 |
|---|---|
| 名称 | SmilChr02G002024 |
| 描述 | uncharacterized SmilChr02G002024 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 36460618 - 36461580 / + |
| NCBI Gene ID | LOC131008385 |
|---|---|
| GeneID | 131008385 |
| locus_tag | - |
| NCBI Name | LOC131008385 |
| 原始查询 | SmilChr02G002024 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=30.9; qcov=0.466; evalue=2.03e-09; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008385 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057791252.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057791252.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057791252.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057791252.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057791252.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:36460630 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B32,B5,B57 |
Chr2:36460657 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:36460683 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B108,B33,C23 |
Chr2:36460722 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A24,B131,D11 |
Chr2:36460749 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B32,B5 |
Chr2:36460805 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr2:36460831 |
C |
T |
EMS_canonical_SNV | stop_gained | 3 | B32,B5,B57 |
Chr2:36460831 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B32,B5,B57 |
Chr2:36460851 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B37 |
Chr2:36460861 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B37 |
Chr2:36460881 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B99 |
Chr2:36460929 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A24,B131,B19,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。