当前解析结果
SmilChr02G002032| 统一新 Gene ID | SmilChr02G002032 |
|---|---|
| 名称 | SmilChr02G002032 |
| 描述 | uncharacterized SmilChr02G002032 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 36620790 - 36622199 / + |
| NCBI Gene ID | LOC131008390 |
|---|---|
| GeneID | 131008390 |
| locus_tag | - |
| NCBI Name | LOC131008390 |
| 原始查询 | SmilChr02G002032 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | confidence=no_hit |
| 产物 | confidence=no_hit |
| Arabidopsis | -- |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008390 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057791257.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057791257.1 |
| 3 | Cytoplasmic granule | 细胞质颗粒 | 0.20000 | XP_057791257.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057791257.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057791257.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:36620801 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B131,B41,B93,C4 |
Chr2:36620803 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B87,C24,C50 |
Chr2:36620832 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B131,B24,B75,B93,C4 |
Chr2:36620836 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A5 |
Chr2:36620838 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A14,A9,B14,D1,D8 |
Chr2:36620859 |
C |
T |
EMS_canonical_SNV | stop_gained | 8 | A5,B101,B131,B24,B41,B75,B93,C4 |
Chr2:36620915 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B66,B85 |
Chr2:36620925 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B75 |
Chr2:36620942 |
A |
AGC |
2bp_insertion | frameshift_variant | 15 | A11,B128,B29,B35,B57,B66,B85,B88,C25,C30,C38,C40,C48,C82,C85 |
Chr2:36620943 |
AAC |
A |
2bp_deletion | frameshift_variant | 15 | A11,B128,B29,B35,B57,B66,B85,B88,C25,C30,C38,C40,C48,C82,C85 |
Chr2:36620949 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A5 |
Chr2:36620983 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A13,B11,B61,C35,C86 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。