当前解析结果
SmilChr02G002046| 统一新 Gene ID | SmilChr02G002046 |
|---|---|
| 名称 | SmilChr02G002046 |
| 描述 | membrane-bound O-acyltransferase gup1-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 36865647 - 36866610 / + |
| NCBI Gene ID | LOC131012243 |
|---|---|
| GeneID | 131012243 |
| locus_tag | - |
| NCBI Name | LOC131012243 |
| 原始查询 | SmilChr02G002046 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | membrane-bound O-acyltransferase gup1-like |
| 产物 | membrane-bound O-acyltransferase gup1-like |
| Arabidopsis | AT1G57600 (AT1G57600)MBOAT (membrane bound O-acyl transferase) family protein [Source:NCBI gene (formerly Entrezgene);Acc:842136] identity=67; qcov=1; evalue=2.96e-38; confidence=medium |
| Rice | Os05g0144000- identity=61.5; qcov=1; evalue=1.64e-33; confidence=medium |
| GO | GO:0005783 (endoplasmic reticulum); GO:0016746 (acyltransferase activity) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012243 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057796143.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 1.00000 | XP_057796143.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057796143.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057796143.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057796143.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:36865696 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B40,B6,C36,D11 |
Chr2:36865709 |
CT |
C |
1bp_deletion | frameshift_variant | 5 | A20,B50,C14,C19,C74 |
Chr2:36865709 |
CT |
C |
1bp_deletion | CDS_variant | 5 | A20,B50,C14,C19,C74 |
Chr2:36865734 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B121,C80 |
Chr2:36866260 |
C |
T |
EMS_canonical_SNV | stop_gained | 2 | B54,C81 |
Chr2:36866260 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B54,C81 |
Chr2:36866266 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B1,B20 |
Chr2:36866301 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C55 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。