Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002075`

染色体: Chr02 坐标: 37333377-37345311 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002075`
名称	SmilChr02G002075
描述	probable sugar phosphate/phosphate translocator At1g06470
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	37333377 - 37345311 / `+`

ID 对照

NCBI Gene ID	`LOC131012269`
GeneID	`131012269`
locus_tag	`-`
NCBI Name	`LOC131012269`
原始查询	`SmilChr02G002075`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	probable sugar phosphate/phosphate translocator At1g06470
产物	probable sugar phosphate/phosphate translocator At1g06470
Arabidopsis	`AT1G06470` (AT1G06470) Nucleotide/sugar transporter family protein [Source:NCBI gene (formerly Entrezgene);Acc:837159] identity=64.8; qcov=0.972; evalue=4.23e-168; confidence=high
Rice	`Os06g0153200` - identity=58.6; qcov=1.04; evalue=1.44e-155; confidence=high
GO	GO:0005793 (endoplasmic reticulum-Golgi intermediate compartment); GO:0005794 (Golgi apparatus); GO:0005801 (cis-Golgi network); GO:0015297 (antiporter activity); GO:0015786 (UDP-glucose transmembrane transport)
KEGG	-
Pfam	PF03151 (TPT); PF08449 (UAA)
InterPro	-
eggNOG	-
NR	GeneID:131012269

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Golgi apparatus	高尔基体	1.00000	`XP_057796166.1`
2	Trans-golgi network	Trans-golgi network	0.20000	`XP_057796166.1`
3	Vacuole membrane	液泡膜	0.20000	`XP_057796168.1`
4	Nucleus	细胞核	0.00000	`XP_057796168.1`
5	Chromosome	染色体	0.00000	`XP_057796168.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:37334415`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B127
`Chr2:37336135`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B32,C53
`Chr2:37337784`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B121,C80,D11
`Chr2:37337904`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B63,B94,C10
`Chr2:37338251`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B32,C53
`Chr2:37344742`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B63,B83
`Chr2:37344745`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr2:37344765`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B123,C5

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796166.1

417 aa

208

417

TPT

UAA

PF03151 TPT 71-369 aa PF08449 UAA 108-369 aa

XP_057796167.1

417 aa

208

417

TPT

UAA

PF03151 TPT 71-369 aa PF08449 UAA 108-369 aa

XP_057796168.1

395 aa

198

395

TPT

UAA

PF03151 TPT 71-211 aa PF08449 UAA 235-347 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796166.1`	Pfam	`PF03151`	TPT	Family	71	369	4e-25	89.5	Triose-phosphate Transporter family
`XP_057796166.1`	Pfam	`PF08449`	UAA	Family	108	369	8.7e-13	48.8	UAA transporter family
`XP_057796167.1`	Pfam	`PF03151`	TPT	Family	71	369	4e-25	89.5	Triose-phosphate Transporter family
`XP_057796167.1`	Pfam	`PF08449`	UAA	Family	108	369	8.7e-13	48.8	UAA transporter family
`XP_057796168.1`	Pfam	`PF03151`	TPT	Family	71	211	2.2e-16	60.8	Triose-phosphate Transporter family
`XP_057796168.1`	Pfam	`PF08449`	UAA	Family	235	347	4.1e-10	40.0	UAA transporter family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

4 records

下载 cDNA FASTA

XR_009097255.1
TAAATATTGGGATTTGGAACCGGAATCAGTTGACGGTTAAACCAACGACAGAATTCACCTGATGACCAAGCATTCGTCAGCAGCTATTATTCCATACAAAATCAAGAAAACAAGGGATTCAAAATCTTATGCATAAATCAGGAAGAATCGATATCACCGTTATGTAGCTTTGAGATCAAATGAGCTGAGATTTCTGCGGGCAAGCAACGTTGGAGCTGGTTCGGTTTGGAGCTGCAAATAAATAATTTTGTGCAAGCCAT...

XM_057940185.1
TTAACACAATTATGCTTGGTAGATTATAATAATCAAAATATTAAATATTGGGATTTGGAACCGGAATCAGTTGACGGTTAAACCAACGACAGAATTCACCTGATGACCAAGCATTCGTCAGCAGCTATTATTCCATACAAAATCAAGAAAACAAGGGATTCAAAATCTTATGCATAAATCAGGAAGAATCGATATCACCGTTATGTAGCTTTGAGATCAAATGAGCTGAGATTTCTGCGGGCAAGCAACGTTGGAGCTGG...

CDS

3 records

下载 CDS FASTA

LOC131012269
ATGGAGCTTGGTGATGTACATAATAGATCTCCCAGCAGTGGTGATGCACACAATAGGTCACCCTTTGGTTGCGATTTACACGATATTGAAAATGGTCACACCGTCAATAGAAGACTACATACAAGTAGCAGCAGCAGCCTAAACCATGTGGACTACCAGAGCCTGTCTAAGAGAGATATAGAGAACCCGGTTTCTGTTTCTGATGTGGTGAAAACATTGTTTCTAATACTGGCCTGGTACACAATCAGTACATTTTTGAC...

Protein

3 records

下载 Protein FASTA

XP_057796166.1
MELGDVHNRSPSSGDAHNRSPFGCDLHDIENGHTVNRRLHTSSSSSLNHVDYQSLSKRDIENPVSVSDVVKTLFLILAWYTISTFLTLYNKTLLGDDLGKFPAPLLMNTIHFVMQAALSTAITWFWPDRFHSSVMSWSDYFARVVPTALSTAMDVNLSNASLVFISVTFATMCKSASPIFLLVFAFAFRLESPSMKLFGIMFVISAGILLTVAKETEFDFWGFIFVMLAAVMSGFRWTMTQILLQKESYGLKNPLTFMSY...

XP_057796167.1
MELGDVHNRSPSSGDAHNRSPFGCDLHDIENGHTVNRRLHTSSSSSLNHVDYQSLSKRDIENPVSVSDVVKTLFLILAWYTISTFLTLYNKTLLGDDLGKFPAPLLMNTIHFVMQAALSTAITWFWPDRFHSSVMSWSDYFARVVPTALSTAMDVNLSNASLVFISVTFATMCKSASPIFLLVFAFAFRLESPSMKLFGIMFVISAGILLTVAKETEFDFWGFIFVMLAAVMSGFRWTMTQILLQKESYGLKNPLTFMSY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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