当前解析结果
SmilChr02G002124| 统一新 Gene ID | SmilChr02G002124 |
|---|---|
| 名称 | SmilChr02G002124 |
| 描述 | embryonic protein DC-8 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 38013258 - 38015255 / + |
| NCBI Gene ID | LOC131012310 |
|---|---|
| GeneID | 131012310 |
| locus_tag | - |
| NCBI Name | LOC131012310 |
| 原始查询 | SmilChr02G002124 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | embryonic protein DC-8 |
| 产物 | embryonic protein DC-8 |
| Arabidopsis | AT2G42560 (AT2G42560)late embryosis abundant domain-containing protein / LEA domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:818856] identity=33.9; qcov=1.16; evalue=2.24e-47; confidence=low |
| Rice | Os03g0322900 (LEA17)- identity=36.1; qcov=0.268; evalue=6.12e-09; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012310 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytosol | 细胞质基质 | 0.80000 | XP_057796223.1 |
| 2 | Cell membrane | 细胞膜 | 0.40000 | XP_057796223.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057796223.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057796223.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057796223.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:38013359 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A13,B108,C12,C23,C57 |
Chr2:38013478 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B127,B129,B91,C58 |
Chr2:38013481 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr2:38013571 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B30,C37,D4 |
Chr2:38013620 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B35,C47,C48,C5 |
Chr2:38013791 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr2:38013830 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B140,B63,B83,C8 |
Chr2:38013899 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A14,A9,B89,C35,D1 |
Chr2:38014048 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D8 |
Chr2:38014094 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B127,B30,B35,C37,D4 |
Chr2:38014194 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B130,B54 |
Chr2:38014229 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。