当前解析结果
SmilChr02G002147| 统一新 Gene ID | SmilChr02G002147 |
|---|---|
| 名称 | SmilChr02G002147 |
| 描述 | 8-hydroxyquercetin 8-O-methyltransferase-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 38611861 - 38613466 / - |
| NCBI Gene ID | LOC131012338 |
|---|---|
| GeneID | 131012338 |
| locus_tag | - |
| NCBI Name | LOC131012338 |
| 原始查询 | SmilChr02G002147 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | 8-hydroxyquercetin 8-O-methyltransferase-like |
| 产物 | 8-hydroxyquercetin 8-O-methyltransferase-like |
| Arabidopsis | AT4G35160 (AT4G35160)O-methyltransferase family protein [Source:NCBI gene (formerly Entrezgene);Acc:829668] identity=37.3; qcov=1.02; evalue=1.29e-63; confidence=medium |
| Rice | Os08g0290700- identity=42; qcov=1.01; evalue=1.59e-96; confidence=medium |
| GO | GO:0008171 (O-methyltransferase activity); GO:0008757 (S-adenosylmethionine-dependent methyltransferase activity); GO:0019438 (GO:0019438); GO:0032259 (methylation); GO:0046983 (protein dimerization activity) |
| KEGG | - |
| Pfam | PF00891 (Methyltransf_2); PF08100 (Dimerisation) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012338 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057796254.1 |
| 2 | Cytosol | 细胞质基质 | 1.00000 | XP_057796254.1 |
| 3 | Nucleus | 细胞核 | 0.20000 | XP_057796254.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057796254.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057796254.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:38612061 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,B34 |
Chr2:38612073 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B10,B34 |
Chr2:38612078 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A5,B114,B115,B126,B70 |
Chr2:38612081 |
A |
AG |
1bp_insertion | frameshift_variant | 2 | B10,B34 |
Chr2:38612081 |
A |
AG |
1bp_insertion | CDS_variant | 2 | B10,B34 |
Chr2:38612082 |
A |
AT |
1bp_insertion | frameshift_variant | 2 | B10,B34 |
Chr2:38612082 |
A |
AT |
1bp_insertion | CDS_variant | 2 | B10,B34 |
Chr2:38612091 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B10,B34 |
Chr2:38612116 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B129,B91,C58 |
Chr2:38612143 |
TCG |
T |
2bp_deletion | frameshift_variant | 4 | B2,B34,B89,C78 |
Chr2:38612143 |
TCG |
T |
2bp_deletion | CDS_variant | 4 | B2,B34,B89,C78 |
Chr2:38612148 |
TC |
T |
1bp_deletion | frameshift_variant | 3 | B10,B34,C78 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057796254.1PF08100
Dimerisation 21-108 aa
PF00891
Methyltransf_2 130-340 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057796254.1 |
Pfam | PF08100 |
Dimerisation | Domain | 21 | 108 | 8.8e-21 | 74.4 | O-methyltransferase dimerisation domain |
XP_057796254.1 |
Pfam | PF00891 |
Methyltransf_2 | Domain | 130 | 340 | 7.5e-52 | 176.4 | O-methyltransferase domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。