当前解析结果
SmilChr02G002175| 统一新 Gene ID | SmilChr02G002175 |
|---|---|
| 名称 | SmilChr02G002175 |
| 描述 | uncharacterized SmilChr02G002175 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 38975006 - 38978265 / + |
| NCBI Gene ID | LOC131012360 |
|---|---|
| GeneID | 131012360 |
| locus_tag | - |
| NCBI Name | LOC131012360 |
| 原始查询 | SmilChr02G002175 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | acyl-UDP-N-acetylglucosamine O-acyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:828941]; symbol=AT4G28260; hit=AT4G28260; species=arabidopsis; confidence=high |
| 产物 | acyl-UDP-N-acetylglucosamine O-acyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:828941]; symbol=AT4G28260; hit=AT4G28260; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G28260 (AT4G28260)acyl-UDP-N-acetylglucosamine O-acyltransferase [Source:NCBI gene (formerly Entrezgene);Acc:828941] identity=48.2; qcov=1.02; evalue=3.46e-162; confidence=high |
| Rice | Os10g0500600- identity=40.7; qcov=0.933; evalue=1.2e-101; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131012360 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057796268.1 |
| 2 | Nucleoplasm | 核质 | 0.20000 | XP_057796268.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057796268.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057796268.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057796268.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:38975941 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B97 |
Chr2:38976243 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A24,B127,B31,B50,C86 |
Chr2:38976373 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C2,C32,C68 |
Chr2:38976410 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B63,B83 |
Chr2:38976578 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A24,B127,B31,B50,C86 |
Chr2:38976775 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B131,C37 |
Chr2:38976862 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B3,B31,B87,C64,C66 |
Chr2:38976946 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B131,B26,B45 |
Chr2:38977658 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B89 |
Chr2:38977702 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B115,B94,C45,C49 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。