当前解析结果
SmilChr02G002374| 统一新 Gene ID | SmilChr02G002374 |
|---|---|
| 名称 | SmilChr02G002374 |
| 描述 | glutathione S-transferase T3-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 41582996 - 41585138 / - |
| NCBI Gene ID | LOC131008476 |
|---|---|
| GeneID | 131008476 |
| locus_tag | - |
| NCBI Name | LOC131008476 |
| 原始查询 | SmilChr02G002374 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | glutathione S-transferase T3-like |
| 产物 | glutathione S-transferase T3-like |
| Arabidopsis | AT5G41220 (GSTT3)glutathione S-transferase THETA 3 [Source:NCBI gene (formerly Entrezgene);Acc:834124] identity=25.8; qcov=0.574; evalue=1.07e-11; confidence=low |
| Rice | Os11g0303800- identity=28.7; qcov=0.759; evalue=1.12e-13; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008476 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057791333.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057791333.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057791333.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057791333.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057791333.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:41583035 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:41584578 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A9,C76,C84 |
Chr2:41584583 |
G |
A |
EMS_canonical_SNV | stop_gained | 2 | B130,C13 |
Chr2:41584583 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B130,C13 |
Chr2:41584585 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B33 |
Chr2:41584599 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A4,B122,B28 |
Chr2:41584606 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B91,C11 |
Chr2:41584610 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B2,C56 |
Chr2:41584618 |
C |
T |
EMS_canonical_SNV | stop_gained | 65 | A2,A20,A22,A6,A8,B10,B103,B11,B110,B12,B121,B127,B131,B132,B133,B16,B17,B18,B19,B23,B33,B36,B46,B48,B51,B52,B57,B60,B67,B72,B73,B75,B8,B84,B86,B88,B9,B90,B94,B99,C1,C10,C12,C15,C16,C19,C22,C28,C30,C33,C35,C41,C51,C53,C56,C64,C66,C75,C77,C80,C81,D10,D2,D6,D7 |
Chr2:41584629 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C76,C84 |
Chr2:41584640 |
G |
A |
EMS_canonical_SNV | stop_gained | 13 | A16,B112,B113,B34,B68,B72,B79,B92,C28,C35,C43,C56,C65 |
Chr2:41584647 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B111,B114,B134 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。