当前解析结果
SmilChr02G002404| 统一新 Gene ID | SmilChr02G002404 |
|---|---|
| 名称 | SmilChr02G002404 |
| 描述 | pollen receptor-like kinase 2 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 41955374 - 41959376 / - |
| NCBI Gene ID | LOC131008484 |
|---|---|
| GeneID | 131008484 |
| locus_tag | - |
| NCBI Name | LOC131008484 |
| 原始查询 | SmilChr02G002404 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | pollen receptor-like kinase 2 |
| 产物 | pollen receptor-like kinase 2 |
| Arabidopsis | AT2G07040 (PRK2A)Leucine-rich repeat protein kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:815274] identity=30.8; qcov=0.799; evalue=1.07e-06; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008484 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cell membrane | 细胞膜 | 1.00000 | XP_057791341.1 |
| 2 | Nucleus | 细胞核 | 0.00000 | XP_057791341.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057791341.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057791341.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057791341.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:41955584 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr2:41955615 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr2:41955627 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C85 |
Chr2:41955664 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr2:41955679 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B35,C2,C32,C68 |
Chr2:41955702 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr2:41955766 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C19,C53,C86 |
Chr2:41955775 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B64,C19,C24,C53,C86 |
Chr2:41955782 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B64,C24 |
Chr2:41955801 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B64,C24 |
Chr2:41955832 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B64 |
Chr2:41955835 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。