当前解析结果
SmilChr02G002544| 统一新 Gene ID | SmilChr02G002544 |
|---|---|
| 名称 | SmilChr02G002544 |
| 描述 | uncharacterized SmilChr02G002544 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 44294146 - 44296288 / - |
| NCBI Gene ID | LOC131013635 |
|---|---|
| GeneID | 131013635 |
| locus_tag | - |
| NCBI Name | LOC131013635 |
| 原始查询 | SmilChr02G002544 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:825662]; symbol=AT4G03620; hit=AT4G03620; species=arabidopsis; confidence=medium |
| 产物 | myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:825662]; symbol=AT4G03620; hit=AT4G03620; species=arabidopsis; confidence=medium |
| Arabidopsis | AT4G03620 (AT4G03620)myosin heavy chain-like protein [Source:NCBI gene (formerly Entrezgene);Acc:825662] identity=42; qcov=1.01; evalue=2.36e-66; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131013635 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 0.80000 | XP_057797747.1 |
| 2 | Nucleus membrane | 核膜 | 0.40000 | XP_057797747.1 |
| 3 | Cytoskeleton | 细胞骨架 | 0.20000 | XP_057797747.1 |
| 4 | Cytosol | 细胞质基质 | 0.20000 | XP_057797747.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057797747.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:44294533 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A9,B74 |
Chr2:44294595 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B122,B13 |
Chr2:44294669 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B113,B5 |
Chr2:44294700 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | C30,C36,C40,C85 |
Chr2:44294769 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B2,B65,C19 |
Chr2:44295000 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr2:44295031 |
TCG |
T |
2bp_deletion | frameshift_variant | 1 | B32 |
Chr2:44295031 |
TCG |
T |
2bp_deletion | CDS_variant | 1 | B32 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。