Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002558`

染色体: Chr02 坐标: 44518929-44522175 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002558`
名称	SmilChr02G002558
描述	uncharacterized SmilChr02G002558
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	44518929 - 44522175 / `+`

ID 对照

NCBI Gene ID	`LOC131011142`
GeneID	`131011142`
locus_tag	`-`
NCBI Name	`LOC131011142`
原始查询	`SmilChr02G002558`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	Low affinity potassium transport system protein [Source:NCBI gene (formerly Entrezgene);Acc:838885]; symbol=AT1G22790; hit=AT1G22790; species=arabidopsis; confidence=medium
产物	Low affinity potassium transport system protein [Source:NCBI gene (formerly Entrezgene);Acc:838885]; symbol=AT1G22790; hit=AT1G22790; species=arabidopsis; confidence=medium
Arabidopsis	`AT1G22790` (AT1G22790) Low affinity potassium transport system protein [Source:NCBI gene (formerly Entrezgene);Acc:838885] identity=48.3; qcov=1.05; evalue=8.03e-47; confidence=medium
Rice	`Os01g0589700` - identity=45.7; qcov=0.969; evalue=1.08e-38; confidence=medium
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131011142

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057794912.1`
2	Nucleus	细胞核	0.60000	`XP_057794905.1`
3	Cytoplasm	细胞质	0.60000	`XP_057794905.1`
4	Chromosome	染色体	0.00000	`XP_057794912.1`
5	Centromere	着丝粒	0.00000	`XP_057794912.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:44519956`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B10,B110,B125,B45,C76
`Chr2:44519983`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B51
`Chr2:44520006`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	A9,B98,D7
`Chr2:44520071`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B51,B72
`Chr2:44520085`	`C`	`T`	EMS_canonical_SNV	stop_gained	4	B51,B72,B90,B92
`Chr2:44520085`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B51,B72,B90,B92
`Chr2:44520099`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B51,B72
`Chr2:44520149`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B51,B72
`Chr2:44520163`	`G`	`GA`	1bp_insertion	frameshift_variant	7	B103,B118,B20,C67,C71,C85,D7
`Chr2:44520434`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C32
`Chr2:44520469`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B1
`Chr2:44521058`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B122

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

34 records

下载 cDNA FASTA

XR_009096746.1
TATTTTAGCCATTTAGTTTCAATTACTGTGATTTGTCACATTTATTCATCTCATTCTATTGGTTCTCAAATTCACTCACTCCGCCCCTATAAATATGCAAAAGAATAACATAAATAATTGAGAAAAAGATCCCATTTTTATTCTGGGTTTGAATAATCTTCACCCTCTAGATTTCTTCATAATTCTCCTGCTCGTATTTATCCGCCGGAAAATCTGTTCGCAATTGCAGATGCAGATTTTTGCCCGGTGATTTCTTCGGT...

XR_009096758.1
TTTAGCCATTTAGTTTCAATTACTGTGATTTGTCACATTTATTCATCTCATTCTATTGGTTCTCAAATTCACTCACTCCGCCCCTATAAATATGCAAAAGAATAACATAAATAATTGAGAAAAAGATCCCATTTTTATTCTGGGTTTGAATAATCTTCACCCTCTAGATTTCTTCATAATTCTCCTGCTCGTATTTATCCGCCGGAAAATCTGTTCGCAATTGCAGATGCAGATTTTTGCCCGGTGATTTCTTCGGTCGA...

CDS

14 records

下载 CDS FASTA

LOC131011142
ATGTTATTAGCTGTAGAAGGAGGCGGCTTTTTCTCTTCTTCAGCTTCTGGATATAGTAAGGGATTGACTCTTCTTCTATTGGGTCAGAAAAACGAGGGGGAACTCATGAGAGTAGCACCGTGGAGCCAGTACCAGTTGGTGGACCAAGAGACTGATCCTTATCCTGATCTCCAGCTGGCTCCTGGGAAGAACCGGCTTGTCCGCGGGTGCGCCTCCTTTGTGTGCTTTGGTCGCGCTGCCGCAGGACATGAAAACTCTTC...

Protein

14 records

下载 Protein FASTA

XP_057794905.1
MLLAVEGGGFFSSSASGYSKGLTLLLLGQKNEGELMRVAPWSQYQLVDQETDPYPDLQLAPGKNRLVRGCASFVCFGRAAAGHENSSPLKVGPTQNQEVLPEPVDIDESKDQVHSIDPVDYNENIRTIVSLKSSLKKSANISPVARAVDSGNSNKHEVDRDVAGQLERRKVQWTDTTGGELFEIREFEMRCSSRKQGCTLRLIWYLLSCKVLLLSSSFLISQSSYHVCTL

XP_057794906.1
MLLAVEGGGFFSSSASGYSKGLTLLLLGQKNEGELMRVAPWSQYQLVDQETDPYPDLQLAPGKNRLVRGCASFVCFGRAAAGHENSSPLKVGPTQNQEVLPEPVDIDESKDQVHSIDPVDYNENIRTIVSLKSSLKKSANISPVARAVDSGNSNKHEVDRDVAGQLERRKVQWTDTTGGELFEIREFEMRCSSRKQGCTLRLIWYLLSLKMDRTMNLIMGLQRVAHAE

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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