Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002698`

染色体: Chr02 坐标: 46752747-46759935 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002698`
名称	SmilChr02G002698
描述	ABC transporter G family member 22-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	46752747 - 46759935 / `+`

ID 对照

NCBI Gene ID	`LOC131011730`
GeneID	`131011730`
locus_tag	`-`
NCBI Name	`LOC131011730`
原始查询	`SmilChr02G002698`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ABC transporter G family member 22-like
产物	ABC transporter G family member 22-like
Arabidopsis	`AT5G06530` (ABCG22) ABC-2 type transporter family protein [Source:NCBI gene (formerly Entrezgene);Acc:830541] identity=59.7; qcov=0.897; evalue=0; confidence=high
Rice	`Os03g0157400` (OsABCG4) - identity=59.1; qcov=0.906; evalue=0; confidence=high
GO	GO:0005524 (ATP binding); GO:0016020 (membrane); GO:0016887 (ATP hydrolysis activity); GO:0140359 (ABC-type transporter activity)
KEGG	smil02010 (ABC transporters - Salvia miltiorrhiza (redroot sage)); smil04981 (Folate transport and metabolism - Salvia miltiorrhiza (redroot sage))
Pfam	PF00005 (ABC_tran); PF01061 (ABC2_membrane); PF12698 (ABC2_membrane_3); PF19055 (ABC2_membrane_7)
InterPro	-
eggNOG	-
NR	GeneID:131011730

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057795521.1`
2	Vacuole	液泡	0.80000	`XP_057795521.1`
3	Vacuole membrane	液泡膜	0.80000	`XP_057795521.1`
4	Nucleus	细胞核	0.00000	`XP_057795521.1`
5	Chromosome	染色体	0.00000	`XP_057795521.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:46757119`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A18,C22
`Chr2:46757147`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr2:46757259`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B102
`Chr2:46757304`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B140,B20,C6,D11
`Chr2:46757311`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B140,B20,C6,D11
`Chr2:46757345`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	A18,C22
`Chr2:46757602`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B42,B43,B70,C57
`Chr2:46757986`	`G`	`GCC`	2bp_insertion	frameshift_variant	2	B121,B18
`Chr2:46757986`	`G`	`GCC`	2bp_insertion	CDS_variant	2	B121,B18
`Chr2:46758086`	`AG`	`A`	1bp_deletion	CDS_variant	1	B13
`Chr2:46758282`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B77
`Chr2:46758303`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B7

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057795521.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795522.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795523.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795524.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795525.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795526.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795528.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795529.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

XP_057795530.1

700 aa

350

700

ABC_tran

ABC2_membrane_7

ABC2_membrane_3

ABC2_membrane_7

ABC2_membrane

PF00005 ABC_tran 161-310 aa PF19055 ABC2_membrane_7 339-413 aa PF12698 ABC2_membrane_3 425-689 aa PF19055 ABC2_membrane_7 432-598 aa PF01061 ABC2_membrane 460-664 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057795521.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795521.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795521.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795521.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795521.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795522.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795522.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795522.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795522.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795522.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795523.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795523.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795523.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795523.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795523.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795524.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795524.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795524.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795524.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795524.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795525.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795525.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795525.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795525.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795525.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795526.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795526.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795526.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795526.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795526.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795528.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795528.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795528.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795528.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795528.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795529.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795529.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795529.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795529.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795529.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter
`XP_057795530.1`	Pfam	`PF00005`	ABC_tran	Domain	161	310	4.2e-31	109.1	ABC transporter
`XP_057795530.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	339	413	2.9e-17	63.4	ABC-2 type transporter
`XP_057795530.1`	Pfam	`PF12698`	ABC2_membrane_3	Family	425	689	3.6e-08	33.6	ABC-2 family transporter protein
`XP_057795530.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	432	598	2.9e-17	63.4	ABC-2 type transporter
`XP_057795530.1`	Pfam	`PF01061`	ABC2_membrane	Domain	460	664	7.4e-40	137.5	ABC-2 type transporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

9 records

下载 cDNA FASTA

XM_057939541.1
TTCATTTCAATGCAAACGCCGTACAGCACTTGATTGCAGCTTATGTAAACCAAAATGAGATTCACAATCCTCCTCATTATTCACCTTATTCTCTACTTCCACAACCACAAGCCAGCACAAATAGGATTTATCTTCAAGAAGCAGTCTGCGTAAAGATTTTCATCCCTACAGCACAGAACATCACAAGGCTTGTGGACGAAGGGGATTAGTGATGCTTTCCCAACACAAGTTTATATGGTTATGATTTTCAGGCTAATCAG...

XM_057939542.1
TTCATTTCAATGCAAACGCCGTACAGCACTTGATTGCAGCTTATGTAAACCAAAATGAGATTCACAATCCTCCTCATTATTCACCTTATTCTCTACTTCCACAACCACAAGCCAGCACAAATAGGATTTATCTTCAAGAAGCAGTCTGCGTAAAGATTTTCATCCCTACAGCACAGAACATCACAAGGCTTGTGGACGAAGGGGATTAGTGATGCTTTCCCAACACAAGTTTATATGGTTATGATTTTCAGGCTAATCAG...

CDS

9 records

下载 CDS FASTA

LOC131011730
ATGGAGGAGACATCAGCAGCTCTTGACTTATCCGAAACCTTCGCCAAGATTAACCAAGACGACATTTTTGGAAGTAATGCAAAATATGAAACGAAACTGAGGTTAACAAAAGACGACAGCCGCATGAAGATCAAAAGGAGAAGCCTTGATCTGAACAATAACGAATCTTCCAAAACCAAACCCTTGTGCAAAACTAAGTCGTTGAGCTCTCACTTTGTAGTAAATATTTTTGATGAACAATGCTCAAATAATCCTCGCAA...

Protein

9 records

下载 Protein FASTA

XP_057795521.1
MEETSAALDLSETFAKINQDDIFGSNAKYETKLRLTKDDSRMKIKRRSLDLNNNESSKTKPLCKTKSLSSHFVVNIFDEQCSNNPRNNEEKGLLSHYQSSSSSLHGVPGPVSDAIDEDDPDSCGWRKIQIEAAFGICIKFEEVSYNVRLKRSKVEKHNIVQGVSGSVYPGEFLALMGPSGGGKTTLLNLLSGRLKCDAGIITYNDRLYTKSLKQRIGFVLQDDTVFPHLTVKETLTYSALLRLPNSLSKQQKMERAMDVL...

XP_057795522.1
MEETSAALDLSETFAKINQDDIFGSNAKYETKLRLTKDDSRMKIKRRSLDLNNNESSKTKPLCKTKSLSSHFVVNIFDEQCSNNPRNNEEKGLLSHYQSSSSSLHGVPGPVSDAIDEDDPDSCGWRKIQIEAAFGICIKFEEVSYNVRLKRSKVEKHNIVQGVSGSVYPGEFLALMGPSGGGKTTLLNLLSGRLKCDAGIITYNDRLYTKSLKQRIGFVLQDDTVFPHLTVKETLTYSALLRLPNSLSKQQKMERAMDVL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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