Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G002715`

染色体: Chr02 坐标: 46990210-46994443 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G002715`
名称	SmilChr02G002715
描述	uncharacterized SmilChr02G002715
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	46990210 - 46994443 / `-`

ID 对照

NCBI Gene ID	`LOC131011749`
GeneID	`131011749`
locus_tag	`-`
NCBI Name	`LOC131011749`
原始查询	`SmilChr02G002715`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831312]; symbol=AT5G14600; hit=AT5G14600; species=arabidopsis; confidence=high
产物	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831312]; symbol=AT5G14600; hit=AT5G14600; species=arabidopsis; confidence=high
Arabidopsis	`AT5G14600` (AT5G14600) S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:831312] identity=72.3; qcov=1.04; evalue=4.86e-172; confidence=high
Rice	`Os04g0319600` - identity=62.9; qcov=1.05; evalue=1.52e-142; confidence=high
GO	GO:0005634 (nucleus); GO:0016429 (GO:0016429); GO:0030488 (tRNA methylation); GO:0031515 (tRNA (m1A) methyltransferase complex)
KEGG	-
Pfam	PF01135 (PCMT); PF08241 (Methyltransf_11); PF08704 (GCD14); PF13847 (Methyltransf_31)
InterPro	-
eggNOG	-
NR	GeneID:131011749

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Nucleus	细胞核	1.00000	`XP_057795558.1`
2	Mitochondrion	线粒体	0.60000	`XP_057795558.1`
3	Nucleolus	核仁	0.40000	`XP_057795558.1`
4	Mitochondrion matrix	线粒体基质	0.40000	`XP_057795558.1`
5	Chromosome	染色体	0.00000	`XP_057795558.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:46990589`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C87
`Chr2:46991037`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B31,C58,C8
`Chr2:46991044`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B31,C58,C65,C8
`Chr2:46991068`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C41
`Chr2:46992010`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B32,B6,C63
`Chr2:46992065`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:46992171`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B118,B124,B22,C25
`Chr2:46992288`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C41
`Chr2:46992402`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B72

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057795558.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795559.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795560.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795561.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795563.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795564.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795565.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795566.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795567.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

XP_057795568.1

308 aa

154

308

GCD14

PCMT

Methyltransf_31

Methyltransf_11

PF08704 GCD14 69-303 aa PF01135 PCMT 98-164 aa PF13847 Methyltransf_31 108-228 aa PF08241 Methyltransf_11 113-210 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057795558.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795558.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795558.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795558.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795559.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795559.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795559.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795559.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795560.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795560.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795560.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795560.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795561.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795561.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795561.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795561.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795563.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795563.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795563.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795563.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795564.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795564.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795564.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795564.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795565.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795565.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795565.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795565.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795566.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795566.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795566.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795566.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795567.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795567.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795567.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795567.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain
`XP_057795568.1`	Pfam	`PF08704`	GCD14	Family	69	303	5.4e-98	328.3	tRNA methyltransferase complex GCD14 subunit
`XP_057795568.1`	Pfam	`PF01135`	PCMT	Family	98	164	2.1e-05	25.1	Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
`XP_057795568.1`	Pfam	`PF13847`	Methyltransf_31	Domain	108	228	3.4e-09	37.4	Methyltransferase domain
`XP_057795568.1`	Pfam	`PF08241`	Methyltransf_11	Domain	113	210	0.00027	22.2	Methyltransferase domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

10 records

下载 cDNA FASTA

XM_057939577.1
AACACTGTACGCTAGAAATTTTATAGGAATATTTTGTTATTTTCACCTCTCTCACACCAGAAAACCCTCGCCCTCTCCGCCTCTCTCTCGCTCTCTCCCTCACTTTCTGCGTTTCTCGTAGCCTTGCATCTCTCTCGCCTCTCACTCGGCGCCGCACAGAATTTCCCACCTTGCCTTCTCCGGCAGCAGCTGTAGCACGGACGTTAGCTACACTGTTCTTCCTCAAAATTCCGGCTAGTCGTCACGGGCACCCTTCACCG...

XM_057939575.1
AACACTGTACGCTAGAAATTTTATAGGAATATTTTGTTATTTTCACCTCTCTCACACCAGAAAACCCTCGCCCTCTCCGCCTCTCTCTCGCTCTCTCCCTCACTTTCTGCGTTTCTCGTAGCCTTGCATCTCTCTCGCCTCTCACTCGGCGCCGCACAGAATTTCCCACCTTGCCTTCTCCGGCAGCAGCTGTAGCACGGTACGTCCCCCTTTTTCGTCGCTCCCTCCGCCTCGCCTCTCACTCGCCACCGCAAGGACCG...

CDS

10 records

下载 CDS FASTA

LOC131011749
ATGTTGCCAACTGATTCTACCAAAACGTTATCATTCAAACGCTGCATAAAGGACGGGGACTTGGTTATCCTGTATGAGCGACACGATGTGATGAAGGCTGTAAAAGTTTCGGAAAAGGGGGTTTTACAGAACCGTTTTGGTATGTTTAAGCATTCTGATTGGATTGGGAAACCATTCGGCTCCAAGATCTTCAGCAGTAAAGGAGGATTTGTTTATTTATTAGCTCCGACTCCTGAGTTGTGGACTTTGGTTTTGAGCCA...

Protein

10 records

下载 Protein FASTA

XP_057795558.1
MLPTDSTKTLSFKRCIKDGDLVILYERHDVMKAVKVSEKGVLQNRFGMFKHSDWIGKPFGSKIFSSKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLEIVPGCVVLESGTGSGSLSTSLARAVAPHGHVYTFDFHQERAASAREDFERTGLSSLVTVGVRDIQGEGFPDEFLGRVDSVFLDLPQPWLAIPSAAKMLQQDGVLCSFSPCIEQVQRSCETLKSSFTDIRTFEILLHTYEVREGHLASWQDGDGVL...

XP_057795559.1
MLPTDSTKTLSFKRCIKDGDLVILYERHDVMKAVKVSEKGVLQNRFGMFKHSDWIGKPFGSKIFSSKGGFVYLLAPTPELWTLVLSHRTQILYIADISFVIMYLEIVPGCVVLESGTGSGSLSTSLARAVAPHGHVYTFDFHQERAASAREDFERTGLSSLVTVGVRDIQGEGFPDEFLGRVDSVFLDLPQPWLAIPSAAKMLQQDGVLCSFSPCIEQVQRSCETLKSSFTDIRTFEILLHTYEVREGHLASWQDGDGVL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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