当前解析结果
SmilChr02G002770| 统一新 Gene ID | SmilChr02G002770 |
|---|---|
| 名称 | SmilChr02G002770 |
| 描述 | wall-associated receptor kinase-like 4 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 47753290 - 47755958 / + |
| NCBI Gene ID | LOC131011799 |
|---|---|
| GeneID | 131011799 |
| locus_tag | - |
| NCBI Name | LOC131011799 |
| 原始查询 | SmilChr02G002770 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | wall-associated receptor kinase-like 4 |
| 产物 | wall-associated receptor kinase-like 4 |
| Arabidopsis | AT1G21240 (WAK3)wall associated kinase 3 [Source:NCBI gene (formerly Entrezgene);Acc:838719] identity=28.4; qcov=1.18; evalue=2.8e-19; confidence=low |
| Rice | Os09g0471200- identity=30.3; qcov=1.18; evalue=3.29e-16; confidence=low |
| GO | GO:0004674 (protein serine/threonine kinase activity); GO:0005886 (plasma membrane); GO:0006468 (protein phosphorylation); GO:0007166 (cell surface receptor signaling pathway) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011799 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 0.80000 | XP_057795626.1 |
| 2 | Cytosol | 细胞质基质 | 0.80000 | XP_057795628.1 |
| 3 | Endoplasmic reticulum | 内质网 | 0.20000 | XP_057795628.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057795626.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057795626.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:47754222 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,B99 |
Chr2:47754387 |
GT |
G |
1bp_deletion | frameshift_variant | 3 | A3,B60,C47 |
Chr2:47754387 |
GT |
G |
1bp_deletion | CDS_variant | 3 | A3,B60,C47 |
Chr2:47754454 |
G |
GA |
1bp_insertion | frameshift_variant | 5 | B129,B41,B91,C12,C74 |
Chr2:47754454 |
G |
GA |
1bp_insertion | CDS_variant | 5 | B129,B41,B91,C12,C74 |
Chr2:47754457 |
TG |
T |
1bp_deletion | frameshift_variant | 121 | A10,A16,A18,A2,A21,A25,A4,A7,A9,B102,B103,B105,B106,B109,B111,B113,B114,B115,B119,B12,B120,B123,B126,B127,B128,B13,B130,B132,B134,B136,B138,B139,B14,B16,B17,B18,B25,B26,B27,B34,B36,B37,B38,B39,B4,B42,B43,B46,B48,B49,B50,B53,B55,B59,B60,B62,B63,B68,B71,B73,B75,B77,B79,B81,B85,B87,B89,B92,B93,B94,B95,B97,B98,B99,C1,C11,C13,C14,C15,C16,C17,C18,C2,C20,C21,C23,C24,C25,C26,C29,C31,C33,C39,C4,C40,C42,C46,C48,C52,C54,C59,C6,C61,C63,C64,C66,C69,C70,C71,C73,C80,C81,C83,C84,C85,C9,D11,D4,D6,D7,D8 |
Chr2:47754458 |
G |
GT |
1bp_insertion | frameshift_variant | 22 | A4,B106,B16,B17,B25,B38,B39,B48,B63,B73,B89,B90,B92,B97,B99,C12,C13,C20,C59,C81,C84,D6 |
Chr2:47754715 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B69 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA3 records
下载 CDS FASTA3 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。