当前解析结果
SmilChr02G002771| 统一新 Gene ID | SmilChr02G002771 |
|---|---|
| 名称 | SmilChr02G002771 |
| 描述 | uncharacterized SmilChr02G002771 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 47763997 - 47765413 / - |
| NCBI Gene ID | LOC131011800 |
|---|---|
| GeneID | 131011800 |
| locus_tag | - |
| NCBI Name | LOC131011800 |
| 原始查询 | SmilChr02G002771 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | TPRXL [Source:NCBI gene (formerly Entrezgene);Acc:838750]; symbol=AT1G21510; hit=AT1G21510; species=arabidopsis; confidence=low |
| 产物 | TPRXL [Source:NCBI gene (formerly Entrezgene);Acc:838750]; symbol=AT1G21510; hit=AT1G21510; species=arabidopsis; confidence=low |
| Arabidopsis | AT1G21510 (AT1G21510)TPRXL [Source:NCBI gene (formerly Entrezgene);Acc:838750] identity=28.9; qcov=1.2; evalue=1.03e-11; confidence=low |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011800 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoskeleton | 细胞骨架 | 1.00000 | XP_057795629.1 |
| 2 | Nucleus | 细胞核 | 0.60000 | XP_057795629.1 |
| 3 | Cell membrane | 细胞膜 | 0.40000 | XP_057795629.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057795629.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057795629.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:47764411 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr2:47764480 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B132,B32,B6,C63 |
Chr2:47764548 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | C2,C32,C68,C8 |
Chr2:47764576 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A10,B118,C82,D4 |
Chr2:47764690 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C10 |
Chr2:47764720 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B93 |
Chr2:47765147 |
AT |
A |
1bp_deletion | frameshift_variant | 42 | A14,A18,A23,A24,A4,A5,A9,B1,B101,B102,B107,B108,B121,B123,B124,B128,B135,B20,B24,B3,B35,B46,B49,B5,B62,B63,B81,B82,B83,B85,C20,C30,C40,C48,C51,C53,C58,C72,C76,C80,C87,D9 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。