当前解析结果
SmilChr02G002807| 统一新 Gene ID | SmilChr02G002807 |
|---|---|
| 名称 | SmilChr02G002807 |
| 描述 | uncharacterized SmilChr02G002807 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 48132758 - 48135941 / - |
| NCBI Gene ID | LOC131011836 |
|---|---|
| GeneID | 131011836 |
| locus_tag | - |
| NCBI Name | LOC131011836 |
| 原始查询 | SmilChr02G002807 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | P0604E01.25; symbol=P0604E01.25; hit=Os08g0561000; species=rice; confidence=low |
| 产物 | P0604E01.25; symbol=P0604E01.25; hit=Os08g0561000; species=rice; confidence=low |
| Arabidopsis | AT1G66235 (AT1G66235)no-apical-meristem-associated carboxy-terminal domain protein [Source:NCBI gene (formerly Entrezgene);Acc:842939] identity=22.2; qcov=0.844; evalue=2.49e-07; confidence=weak |
| Rice | Os08g0561000 (P0604E01.25)- identity=31.9; qcov=0.45; evalue=5.01e-17; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011836 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057795695.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057795695.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057795695.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057795695.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057795695.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:48132895 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr2:48132897 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
Chr2:48132906 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C20 |
Chr2:48132908 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B138,B18,B75,C35,C64 |
Chr2:48132923 |
G |
A |
EMS_canonical_SNV | stop_gained | 5 | B123,B14,B64,B83,C29 |
Chr2:48132923 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B123,B14,B64,B83,C29 |
Chr2:48132947 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B41,B73,C1,C74 |
Chr2:48132957 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A20,B53,C10 |
Chr2:48132971 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B100,B44,B94,C24,C31 |
Chr2:48132975 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B94,C39,C83 |
Chr2:48132980 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
Chr2:48132989 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A20,B53 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。