当前解析结果
SmilChr02G002978| 统一新 Gene ID | SmilChr02G002978 |
|---|---|
| 名称 | SmilChr02G002978 |
| 描述 | uncharacterized SmilChr02G002978 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 50333931 - 50336240 / + |
| NCBI Gene ID | LOC131011991 |
|---|---|
| GeneID | 131011991 |
| locus_tag | - |
| NCBI Name | LOC131011991 |
| 原始查询 | SmilChr02G002978 |
| 来源 | GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:844102]; symbol=AT1G77660; hit=AT1G77660; species=arabidopsis; confidence=high |
| 产物 | Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:844102]; symbol=AT1G77660; hit=AT1G77660; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G77660 (AT1G77660)Histone H3 K4-specific methyltransferase SET7/9 family protein [Source:NCBI gene (formerly Entrezgene);Acc:844102] identity=58.9; qcov=0.998; evalue=3.1e-164; confidence=high |
| Rice | Os09g0453900 (P0488D02.28-1)- identity=77.7; qcov=0.645; evalue=1.32e-150; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | PF02493 (MORN) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011991 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast membrane | 叶绿体膜 | 0.40000 | XP_057795882.1 |
| 2 | Nucleus | 细胞核 | 0.20000 | XP_057795882.1 |
| 3 | Nucleus membrane | 核膜 | 0.20000 | XP_057795882.1 |
| 4 | Cytoplasm | 细胞质 | 0.20000 | XP_057795882.1 |
| 5 | Chloroplast | 叶绿体 | 0.20000 | XP_057795882.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:50334332 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B74 |
Chr2:50334662 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B29 |
Chr2:50334675 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B10 |
Chr2:50334989 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B119 |
Chr2:50335545 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C28 |
Chr2:50335607 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C65 |
Chr2:50335880 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C61 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057795882.1PF02493
MORN 199-216 aa
PF02493
MORN 222-244 aa
PF02493
MORN 245-266 aa
PF02493
MORN 268-289 aa
PF02493
MORN 291-313 aa
PF02493
MORN 314-335 aa
PF02493
MORN 337-357 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057795882.1 |
Pfam | PF02493 |
MORN | Repeat | 199 | 216 | 2e-34 | 116.1 | MORN repeat |
XP_057795882.1 |
Pfam | PF02493 |
MORN | Repeat | 222 | 244 | 2e-34 | 116.1 | MORN repeat |
XP_057795882.1 |
Pfam | PF02493 |
MORN | Repeat | 245 | 266 | 2e-34 | 116.1 | MORN repeat |
XP_057795882.1 |
Pfam | PF02493 |
MORN | Repeat | 268 | 289 | 2e-34 | 116.1 | MORN repeat |
XP_057795882.1 |
Pfam | PF02493 |
MORN | Repeat | 291 | 313 | 2e-34 | 116.1 | MORN repeat |
XP_057795882.1 |
Pfam | PF02493 |
MORN | Repeat | 314 | 335 | 2e-34 | 116.1 | MORN repeat |
XP_057795882.1 |
Pfam | PF02493 |
MORN | Repeat | 337 | 357 | 2e-34 | 116.1 | MORN repeat |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。