当前解析结果
SmilChr02G003035| 统一新 Gene ID | SmilChr02G003035 |
|---|---|
| 名称 | SmilChr02G003035 |
| 描述 | O-fucosyltransferase 23-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 51057441 - 51058186 / + |
| NCBI Gene ID | LOC131010053 |
|---|---|
| GeneID | 131010053 |
| locus_tag | - |
| NCBI Name | LOC131010053 |
| 原始查询 | SmilChr02G003035 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | O-fucosyltransferase 23-like |
| 产物 | O-fucosyltransferase 23-like |
| Arabidopsis | AT3G05320 (AT3G05320)O-fucosyltransferase family protein [Source:NCBI gene (formerly Entrezgene);Acc:819696] identity=61.2; qcov=0.667; evalue=6.01e-29; confidence=medium |
| Rice | Os02g0168500- identity=55.2; qcov=0.653; evalue=3.03e-31; confidence=medium |
| GO | GO:0009875 (pollen-pistil interaction) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010053 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 0.60000 | XP_057793431.1 |
| 2 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057793431.1 |
| 3 | Vacuole | 液泡 | 0.20000 | XP_057793431.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057793431.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057793431.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:51057485 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C83 |
Chr2:51057494 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B14,C34 |
Chr2:51057582 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B100,B14,B52,C34 |
Chr2:51057595 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr2:51057631 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C28,D7 |
Chr2:51057679 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C38,C5 |
Chr2:51057703 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B98 |
Chr2:51057724 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B114,B128,B51,B86 |
Chr2:51057748 |
A |
AAT |
2bp_insertion | frameshift_variant | 1 | B9 |
Chr2:51057748 |
A |
AAT |
2bp_insertion | CDS_variant | 1 | B9 |
Chr2:51057763 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A16,B29,D10 |
Chr2:51057875 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B131,B140,B32 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。