当前解析结果
SmilChr02G003150| 统一新 Gene ID | SmilChr02G003150 |
|---|---|
| 名称 | SmilChr02G003150 |
| 描述 | beta-amyrin 6-beta-monooxygenase-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 52531767 - 52533896 / + |
| NCBI Gene ID | LOC131010146 |
|---|---|
| GeneID | 131010146 |
| locus_tag | - |
| NCBI Name | LOC131010146 |
| 原始查询 | SmilChr02G003150 |
| 来源 | GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | beta-amyrin 6-beta-monooxygenase-like |
| 产物 | beta-amyrin 6-beta-monooxygenase-like |
| Arabidopsis | AT5G36110 (CYP716A1)cytochrome P450, family 716, subfamily A, polypeptide 1 [Source:NCBI gene (formerly Entrezgene);Acc:833607] identity=44.3; qcov=0.951; evalue=7.06e-121; confidence=medium |
| Rice | Os07g0519600- identity=32.8; qcov=0.957; evalue=2.33e-77; confidence=low |
| GO | GO:0004497 (monooxygenase activity); GO:0005506 (iron ion binding); GO:0016125 (sterol metabolic process); GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen); GO:0020037 (heme binding) |
| KEGG | smil00999 (Biosynthesis of various plant secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)) |
| Pfam | PF00067 (p450) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010146 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057793544.1 |
| 2 | Endoplasmic reticulum membrane | 内质网膜 | 0.80000 | XP_057793544.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057793544.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057793544.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057793544.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:52532313 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | A11,B78,B95,C14,C83 |
Chr2:52532314 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B49,B60,B79 |
Chr2:52532360 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C41,D3 |
Chr2:52532493 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,A9,C75,D1 |
Chr2:52532537 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:52532624 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr2:52532660 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B39,C79,D10 |
Chr2:52532713 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B129,B91,C7 |
Chr2:52532758 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B22,B71 |
Chr2:52532927 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:52532930 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B68,C7 |
Chr2:52533533 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | A23,C82 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057793544.1PF00067
p450 167-440 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057793544.1 |
Pfam | PF00067 |
p450 | Domain | 167 | 440 | 4.3e-49 | 168.2 | Cytochrome P450 |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。