Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G003590`

染色体: Chr02 坐标: 57113792-57116892 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G003590`
名称	SmilChr02G003590
描述	uncharacterized SmilChr02G003590
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	57113792 - 57116892 / `+`

ID 对照

NCBI Gene ID	`LOC131010554`
GeneID	`131010554`
locus_tag	`-`
NCBI Name	`LOC131010554`
原始查询	`SmilChr02G003590`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	pfkB-like carbohydrate kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:838547]; symbol=AT1G19600; hit=AT1G19600; species=arabidopsis; confidence=high
产物	pfkB-like carbohydrate kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:838547]; symbol=AT1G19600; hit=AT1G19600; species=arabidopsis; confidence=high
Arabidopsis	`AT1G19600` (AT1G19600) pfkB-like carbohydrate kinase family protein [Source:NCBI gene (formerly Entrezgene);Acc:838547] identity=69.2; qcov=0.868; evalue=2.36e-178; confidence=high
Rice	`Os01g0105900` - identity=68.8; qcov=0.878; evalue=2.78e-175; confidence=high
GO	-
KEGG	-
Pfam	PF00294 (PfkB)
InterPro	-
eggNOG	-
NR	GeneID:131010554

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057794093.1`
2	Cytoplasm	细胞质	0.20000	`XP_057794093.1`
3	Nucleus	细胞核	0.00000	`XP_057794093.1`
4	Chromosome	染色体	0.00000	`XP_057794093.1`
5	Centromere	着丝粒	0.00000	`XP_057794093.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:57113992`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr2:57114055`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B95
`Chr2:57114882`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C37
`Chr2:57114983`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C10
`Chr2:57115122`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	D3
`Chr2:57115871`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C57
`Chr2:57116508`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C29
`Chr2:57116598`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B26,B55,C41,C51,C64
`Chr2:57116622`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C37
`Chr2:57116643`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B71,B82

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057794093.1

402 aa

201

402

PfkB

PF00294 PfkB 93-370 aa

XP_057794094.1

401 aa

200

401

PfkB

PF00294 PfkB 93-369 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057794093.1`	Pfam	`PF00294`	PfkB	Domain	93	370	2.2e-39	136.3	pfkB family carbohydrate kinase
`XP_057794094.1`	Pfam	`PF00294`	PfkB	Domain	93	369	3.2e-39	135.8	pfkB family carbohydrate kinase

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057938110.1
AAAATAACCTAGGAAAGCTAGAAAATTAGAGGCATGTTAAATGCAAATATTGAAAGTAGAGGGATTGCGGCTTATAAATAGATGGTAGAGAGAAGGAAAGGAGGGGAGGAGCGGAAACCAGCAGGCAGCTCAGCTCTAGCCACTACCACCAACCGAATTCGAATTATGGGTGTTGAAATTCAGAGCAAGATCAACGACGACGCTATTCATGGCGCTGCCACGCCGCTCATTCTCGGCTTACAGCCCTCTGCTCTCGTTGA...

XM_057938111.1
AGCTAGAAAATTAGAGGCATGTTAAATGCAAATATTGAAAGTAGAGGGATTGCGGCTTATAAATAGATGGTAGAGAGAAGGAAAGGAGGGGAGGAGCGGAAACCAGCAGGCAGCTCAGCTCTAGCCACTACCACCAACCGAATTCGAATTATGGGTGTTGAAATTCAGAGCAAGATCAACGACGACGCTATTCATGGCGCTGCCACGCCGCTCATTCTCGGCTTACAGCCCTCTGCTCTCGTTGACCACGTGGCAAGAGT...

CDS

2 records

下载 CDS FASTA

LOC131010554
ATGGTAGAGAGAAGGAAAGGAGGGGAGGAGCGGAAACCAGCAGGCAGCTCAGCTCTAGCCACTACCACCAACCGAATTCGAATTATGGGTGTTGAAATTCAGAGCAAGATCAACGACGACGCTATTCATGGCGCTGCCACGCCGCTCATTCTCGGCTTACAGCCCTCTGCTCTCGTTGACCACGTGGCAAGAGTTGATTGCTCCCTCCTCTCCCGGATCCCTGGCGAGTCCGGCGGCTCCTTCCCTGTTGCGGCTGAAGA...

Protein

2 records

下载 Protein FASTA

XP_057794093.1
MVERRKGGEERKPAGSSALATTTNRIRIMGVEIQSKINDDAIHGAATPLILGLQPSALVDHVARVDCSLLSRIPGESGGSFPVAAEELKFVLSEVNNHFVASPEKGSSLKTIAGGSVANTIRGLAAGFGITCGIIGACGDDDEGSLFIDNMSFYKVDLSRLRLKIGPTAQCVCLVDELGNRTMRPCLSSAVKVQADDLTTLDLRGSRWLVMRYGIFNIEVIQAAIKIAKQEGVSVSLDLASFEMVRKFRLPLLQLLESGG...

XP_057794094.1
MVERRKGGEERKPAGSSALATTTNRIRIMGVEIQSKINDDAIHGAATPLILGLQPSALVDHVARVDCSLLSRIPGESGGSFPVAAEELKFVLSEVNNHFVASPEKGSSLKTIAGGSVANTIRGLAAGFGITCGIIGACGDDDEGSLFIDNMSFYKVDLSRLRLKIGPTAQCVCLVDELGNRTMRPCLSSAVKVQADDLTTLDLRGSRWLVMRYGIFNIEVIQAAIKIAKQEGVSVSLDLASFEMVRKFRLPLLQLLESGG...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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