当前解析结果
SmilChr02G003693| 统一新 Gene ID | SmilChr02G003693 |
|---|---|
| 名称 | SmilChr02G003693 |
| 描述 | protein ECERIFERUM 16 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 58373232 - 58377588 / - |
| NCBI Gene ID | LOC131010646 |
|---|---|
| GeneID | 131010646 |
| locus_tag | - |
| NCBI Name | LOC131010646 |
| 原始查询 | SmilChr02G003693 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | protein ECERIFERUM 16 |
| 产物 | protein ECERIFERUM 16 |
| Arabidopsis | AT5G44150 (AT5G44150)phosphorelay protein [Source:NCBI gene (formerly Entrezgene);Acc:834438] identity=37.6; qcov=1.05; evalue=6.48e-53; confidence=medium |
| Rice | Os05g0564000- identity=39; qcov=0.547; evalue=1.61e-28; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010646 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057794258.1 |
| 2 | Cytosol | 细胞质基质 | 0.80000 | XP_057794258.1 |
| 3 | Golgi apparatus | 高尔基体 | 0.40000 | XP_057794258.1 |
| 4 | Cytoplasmic ribonucleoprotein granule | Cytoplasmic ribonucleoprotein granule | 0.20000 | XP_057794258.1 |
| 5 | Trans-golgi network | Trans-golgi network | 0.20000 | XP_057794258.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:58373334 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:58373360 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:58373579 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr2:58373584 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C70 |
Chr2:58373626 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B10,B47,C34,D9 |
Chr2:58373686 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | A11,A7,B133,C25,C81 |
Chr2:58374577 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B7,B84 |
Chr2:58375230 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B18,B63,B83,C79 |
Chr2:58375315 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B10,B47,C34,D9 |
Chr2:58375859 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C70 |
Chr2:58375878 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B114 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。