当前解析结果
SmilChr02G003782| 统一新 Gene ID | SmilChr02G003782 |
|---|---|
| 名称 | SmilChr02G003782 |
| 描述 | uncharacterized SmilChr02G003782 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 59490863 - 59492993 / - |
| NCBI Gene ID | LOC131009816 |
|---|---|
| GeneID | 131009816 |
| locus_tag | - |
| NCBI Name | LOC131009816 |
| 原始查询 | SmilChr02G003782 |
| 来源 | GFF basic annotation; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=weak |
| 产物 | MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859]; symbol=MUG7; hit=AT3G05850; species=arabidopsis; confidence=weak |
| Arabidopsis | AT3G05850 (MUG7)MuDR family transposase [Source:NCBI gene (formerly Entrezgene);Acc:3768859] identity=23.6; qcov=0.978; evalue=9.87e-47; confidence=weak |
| Rice | Os12g0597300- identity=27.4; qcov=0.63; evalue=9.63e-41; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | PF00872 (Transposase_mut); PF10551 (MULE) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009816 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057793206.1 |
| 2 | Cytoplasm | 细胞质 | 0.20000 | XP_057793206.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057793206.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057793206.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057793206.1 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan;位置为对应蛋白序列上的氨基酸坐标。
XP_057793206.1PF00872
Transposase_mut 427-527 aa
PF10551
MULE 428-522 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057793206.1 |
Pfam | PF00872 |
Transposase_mut | Family | 427 | 527 | 1.6e-10 | 41.2 | Transposase, Mutator family |
XP_057793206.1 |
Pfam | PF10551 |
MULE | Domain | 428 | 522 | 2.3e-20 | 73.5 | MULE transposase domain |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。