当前解析结果
SmilChr02G003872| 统一新 Gene ID | SmilChr02G003872 |
|---|---|
| 名称 | SmilChr02G003872 |
| 描述 | uncharacterized SmilChr02G003872 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 60756729 - 60759180 / + |
| NCBI Gene ID | LOC131009830 |
|---|---|
| GeneID | 131009830 |
| locus_tag | - |
| NCBI Name | LOC131009830 |
| 原始查询 | SmilChr02G003872 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820534]; symbol=AT3G13340; hit=AT3G13340; species=arabidopsis; confidence=high |
| 产物 | Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820534]; symbol=AT3G13340; hit=AT3G13340; species=arabidopsis; confidence=high |
| Arabidopsis | AT3G13340 (AT3G13340)Transducin/WD40 repeat-like superfamily protein [Source:NCBI gene (formerly Entrezgene);Acc:820534] identity=77.1; qcov=0.614; evalue=2.66e-95; confidence=high |
| Rice | Os02g0721600 (SRWD2)- identity=72.9; qcov=0.639; evalue=4.56e-93; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009830 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057793219.1 |
| 2 | Cytoplasm | 细胞质 | 0.80000 | XP_057793219.1 |
| 3 | Cytosol | 细胞质基质 | 0.60000 | XP_057793219.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057793219.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057793219.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:60756734 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A4,C30 |
Chr2:60756735 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B1,B44,C15 |
Chr2:60756756 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B114 |
Chr2:60756809 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
Chr2:60756867 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr2:60757530 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr2:60757585 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C82 |
Chr2:60758632 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A7 |
Chr2:60758807 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C50 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。