Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G003875`

染色体: Chr02 坐标: 60804336-60805807 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G003875`
名称	SmilChr02G003875
描述	uncharacterized SmilChr02G003875
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	60804336 - 60805807 / `+`

ID 对照

NCBI Gene ID	`LOC131010818`
GeneID	`131010818`
locus_tag	`-`
NCBI Name	`LOC131010818`
原始查询	`SmilChr02G003875`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; Arabidopsis/Rice homolog
描述	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:841102]; symbol=AT1G45688; hit=AT1G45688; species=arabidopsis; confidence=high
产物	uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:841102]; symbol=AT1G45688; hit=AT1G45688; species=arabidopsis; confidence=high
Arabidopsis	`AT1G45688` (AT1G45688) uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:841102] identity=50.4; qcov=0.837; evalue=1.46e-57; confidence=high
Rice	`Os04g0689500` - identity=47.3; qcov=0.893; evalue=4.1e-51; confidence=high
GO	-
KEGG	-
Pfam	-
InterPro	-
eggNOG	-
NR	GeneID:131010818

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057794463.1`
2	Endoplasmic reticulum	内质网	0.60000	`XP_057794464.1`
3	Vacuole	液泡	0.60000	`XP_057794464.1`
4	Vacuole membrane	液泡膜	0.40000	`XP_057794464.1`
5	Endoplasmic reticulum membrane	内质网膜	0.20000	`XP_057794464.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:60804613`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B118
`Chr2:60804720`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B98,C54,C82
`Chr2:60804852`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C71,D11
`Chr2:60805163`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B107,B140
`Chr2:60805319`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B98,C18,C39
`Chr2:60805342`	`C`	`T`	EMS_canonical_SNV	stop_gained	5	B41,B98,C18,C39,C82
`Chr2:60805342`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B41,B98,C18,C39,C82
`Chr2:60805345`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:60805390`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr2:60805424`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B104
`Chr2:60805426`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B132
`Chr2:60805493`	`TG`	`T`	1bp_deletion	frameshift_variant	1	A3

进入 EMS 突变库

预测功能结构域

当前发布数据中，此基因没有可展示的 Pfam 结构域命中。

进入结构域查询

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057938480.1
ATTATTAAGTGAAAGAAGAATTGGATCATAGGAAGTCATGAATATGATATTCATGGCTTCACAATAATGAGAAAAACCCGATTGCAAAATCCTCACAAAATCTTTTCCTCAAATAAAATTTCTCATCTTCTCCATTTCAACACAGCTCGAATTCAGCAGGAAAGGACAAAAACGATTTTTCACACACTAAAAAATGCACGCGAAGACGCATTCGGAAGTGGGCAGCCTGGCGCCGTCGTCGCCGGACCGCAACCGGCCAG...

XM_057938481.1
AAGTGAAAGAAGAATTGGATCATAGGAAGTCATGAATATGATATTCATGGCTTCACAATAATGAGAAAAACCCGATTGCAAAATCCTCACAAAATCTTTTCCTCAAATAAAATTTCTCATCTTCTCCATTTCAACACAGCTCGAATTCAGCAGGAAAGGACAAAAACGATTTTTCACACACTAAAAAATGCACGCGAAGACGCATTCGGAAGTGGGCAGCCTGGCGCCGTCGTCGCCGGACCGCAACCGGCCAGCGTACT...

CDS

2 records

下载 CDS FASTA

LOC131010818
ATGCACGCGAAGACGCATTCGGAAGTGGGCAGCCTGGCGCCGTCGTCGCCGGACCGCAACCGGCCAGCGTACTACGTGCAGAGCCCGTCGCACGACGGCGAGAAGACGACGGCGTCGGTCACTTCAACCCCGATCCTGAGCAGCCCCGTGGGGTCCCCGCGCCACTCCCGAGAGTCCTCCACCTCGGCCCCGCTCAAGCCCGGGTCCTGCTCGAGGAAGGTCTCCTCCGGATCGGAGAGGAGGGACGACGGATTCACGAA...

Protein

2 records

下载 Protein FASTA

XP_057794463.1
MHAKTHSEVGSLAPSSPDRNRPAYYVQSPSHDGEKTTASVTSTPILSSPVGSPRHSRESSTSAPLKPGSCSRKVSSGSERRDDGFTNWEFDLMEDEEDGEPPDQLPPPCFFFAFFVVVFLLFSLILWGLSKHQKPNITMQSIKFERFTVQAGSDSSGVSTDMISLNSTLNFKYRNTATFFGVHVSSTPVSLSYSQLNIAFGVLQEFYKKRKQEKNVSVVVSGDNIPMYGNGASLTTPTGMSEFPVTLKLEVSVGSRAHVL...

XP_057794464.1
MHAKTHSEVGSLAPSSPDRNRPAYYVQSPSHDGEKTTASVTSTPILSSPVGSPRHSRESSTSAPLKPGSCSRKVSSGSERRDDGFTNWEFDLMEDEEDGEPPDQLPPPCFFFAFFVVVFLLFSLILWGLSKHQKPNITMQSIKFERFTVQAGSDSSGVSTDMISLNSTLNFKYRNTATFFGVHVSSTPVSLSYSQLNIAFASRILQEEEARKECECGGERRQHSHVWKRGEPHHPDGDVGVSGDAQVGGLGWIKSSCFGE...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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