当前解析结果
SmilChr02G003920| 统一新 Gene ID | SmilChr02G003920 |
|---|---|
| 名称 | SmilChr02G003920 |
| 描述 | uncharacterized SmilChr02G003920 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 61280639 - 61283858 / + |
| NCBI Gene ID | LOC131010861 |
|---|---|
| GeneID | 131010861 |
| locus_tag | - |
| NCBI Name | LOC131010861 |
| 原始查询 | SmilChr02G003920 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | dimethylallyl, adenosine tRNA methylthiotransferase [Source:NCBI gene (formerly Entrezgene);Acc:829475]; symbol=AT4G33380; hit=AT4G33380; species=arabidopsis; confidence=high |
| 产物 | dimethylallyl, adenosine tRNA methylthiotransferase [Source:NCBI gene (formerly Entrezgene);Acc:829475]; symbol=AT4G33380; hit=AT4G33380; species=arabidopsis; confidence=high |
| Arabidopsis | AT4G33380 (AT4G33380)dimethylallyl, adenosine tRNA methylthiotransferase [Source:NCBI gene (formerly Entrezgene);Acc:829475] identity=57.4; qcov=1.04; evalue=2.18e-128; confidence=high |
| Rice | Os06g0214100- identity=53; qcov=0.981; evalue=2.15e-111; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010861 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Golgi apparatus | 高尔基体 | 1.00000 | XP_057794525.1 |
| 2 | Golgi stack | 高尔基堆 | 0.60000 | XP_057794527.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057794525.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057794525.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057794525.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:61280955 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B10 |
Chr2:61281358 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B10 |
Chr2:61281394 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B139,D6 |
Chr2:61281583 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D10 |
Chr2:61281607 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B7 |
Chr2:61281627 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B40,C53,C78 |
Chr2:61282592 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B139,C5,D6,D9 |
Chr2:61282787 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C2,C32,C68 |
Chr2:61282802 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B107,B140 |
Chr2:61282840 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B22,B78 |
Chr2:61283257 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B94 |
Chr2:61283259 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B132,B94,C47 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。