当前解析结果
SmilChr02G004040| 统一新 Gene ID | SmilChr02G004040 |
|---|---|
| 名称 | SmilChr02G004040 |
| 描述 | uncharacterized SmilChr02G004040 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 62717282 - 62719057 / + |
| NCBI Gene ID | LOC131010973 |
|---|---|
| GeneID | 131010973 |
| locus_tag | - |
| NCBI Name | LOC131010973 |
| 原始查询 | SmilChr02G004040 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834239]; symbol=AT5G42330; hit=AT5G42330; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834239]; symbol=AT5G42330; hit=AT5G42330; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G42330 (AT5G42330)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:834239] identity=40.6; qcov=1.02; evalue=2.33e-30; confidence=medium |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131010973 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057794675.1 |
| 2 | Chromosome | 染色体 | 0.20000 | XP_057794675.1 |
| 3 | Cytoskeleton | 细胞骨架 | 0.20000 | XP_057794675.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057794675.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057794675.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:62717501 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B115,C10,C45 |
Chr2:62718436 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr2:62718438 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr2:62718524 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr2:62718543 |
G |
GAT |
2bp_insertion | frameshift_variant | 1 | C71 |
Chr2:62718543 |
G |
GAT |
2bp_insertion | CDS_variant | 1 | C71 |
Chr2:62718544 |
G |
GA |
1bp_insertion | frameshift_variant | 1 | C71 |
Chr2:62718544 |
G |
GA |
1bp_insertion | CDS_variant | 1 | C71 |
Chr2:62718568 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B53,C37 |
Chr2:62718623 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C32,C68 |
Chr2:62718627 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A21,B104,B84 |
Chr2:62718752 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,B104,B84,D11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。