当前解析结果
SmilChr02G004190| 统一新 Gene ID | SmilChr02G004190 |
|---|---|
| 名称 | SmilChr02G004190 |
| 描述 | uncharacterized SmilChr02G004190 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 64220433 - 64223781 / - |
| NCBI Gene ID | LOC131011111 |
|---|---|
| GeneID | 131011111 |
| locus_tag | - |
| NCBI Name | LOC131011111 |
| 原始查询 | SmilChr02G004190 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | cylicin [Source:NCBI gene (formerly Entrezgene);Acc:2745546]; symbol=AT2G17787; hit=AT2G17787; species=arabidopsis; confidence=low |
| 产物 | cylicin [Source:NCBI gene (formerly Entrezgene);Acc:2745546]; symbol=AT2G17787; hit=AT2G17787; species=arabidopsis; confidence=low |
| Arabidopsis | AT2G17787 (AT2G17787)cylicin [Source:NCBI gene (formerly Entrezgene);Acc:2745546] identity=29.3; qcov=1.1; evalue=2.83e-19; confidence=low |
| Rice | Os10g0124100- identity=39.5; qcov=0.231; evalue=6.48e-07; confidence=weak |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011111 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057794874.1 |
| 2 | Chromosome | 染色体 | 0.00000 | XP_057794874.1 |
| 3 | Centromere | 着丝粒 | 0.00000 | XP_057794874.1 |
| 4 | Chromatin | 染色质 | 0.00000 | XP_057794874.1 |
| 5 | Telomere | 端粒 | 0.00000 | XP_057794874.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:64220630 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B44,D11 |
Chr2:64220728 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B132,B78,C83 |
Chr2:64220919 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B125,B17,B90,B92,C79 |
Chr2:64220930 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D11 |
Chr2:64220952 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C7 |
Chr2:64220983 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B40,C8 |
Chr2:64221110 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B40,C8 |
Chr2:64221179 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B12,B86,C64,C66 |
Chr2:64221336 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C75,D1 |
Chr2:64221342 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C1 |
Chr2:64221392 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B18,B91 |
Chr2:64221405 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C4 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。