当前解析结果
SmilChr02G004205| 统一新 Gene ID | SmilChr02G004205 |
|---|---|
| 名称 | SmilChr02G004205 |
| 描述 | uncharacterized SmilChr02G004205 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 64313770 - 64316621 / + |
| NCBI Gene ID | LOC131011121 |
|---|---|
| GeneID | 131011121 |
| locus_tag | - |
| NCBI Name | LOC131011121 |
| 原始查询 | SmilChr02G004205 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | GDSL esterase/lipase [Source:NCBI gene (formerly Entrezgene);Acc:837674]; symbol=AT1G11320; hit=AT1G11320; species=arabidopsis; confidence=high |
| 产物 | GDSL esterase/lipase [Source:NCBI gene (formerly Entrezgene);Acc:837674]; symbol=AT1G11320; hit=AT1G11320; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G11320 (AT1G11320)GDSL esterase/lipase [Source:NCBI gene (formerly Entrezgene);Acc:837674] identity=46.2; qcov=1.02; evalue=2.88e-128; confidence=high |
| Rice | Os06g0724200- identity=35.1; qcov=0.933; evalue=7.65e-70; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131011121 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Chloroplast | 叶绿体 | 1.00000 | XP_057794885.1 |
| 2 | Chloroplast membrane | 叶绿体膜 | 1.00000 | XP_057794885.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057794885.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057794885.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057794885.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:64314891 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B104,B107,B140,C12 |
Chr2:64314991 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B115,C45 |
Chr2:64315023 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B118 |
Chr2:64315074 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C10,C81 |
Chr2:64315235 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B25,C79 |
Chr2:64315672 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B120,B125,B17,B90,B92 |
Chr2:64315686 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A15,B103,B127,B54 |
Chr2:64315695 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B138,C42 |
Chr2:64315714 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A15,B103,B127 |
Chr2:64315878 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B115,C45 |
Chr2:64316170 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B115,C45 |
Chr2:64316196 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B64,C31,C44 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。