Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G004255`

染色体: Chr02 坐标: 64753795-64759325 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G004255`
名称	SmilChr02G004255
描述	uncharacterized SmilChr02G004255
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	64753795 - 64759325 / `+`

ID 对照

NCBI Gene ID	`LOC131012986`
GeneID	`131012986`
locus_tag	`-`
NCBI Name	`LOC131012986`
原始查询	`SmilChr02G004255`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	Prolyl oligopeptidase family protein [Source:NCBI gene (formerly Entrezgene);Acc:843946]; symbol=AT1G76140; hit=AT1G76140; species=arabidopsis; confidence=high
产物	Prolyl oligopeptidase family protein [Source:NCBI gene (formerly Entrezgene);Acc:843946]; symbol=AT1G76140; hit=AT1G76140; species=arabidopsis; confidence=high
Arabidopsis	`AT1G76140` (AT1G76140) Prolyl oligopeptidase family protein [Source:NCBI gene (formerly Entrezgene);Acc:843946] identity=74.3; qcov=0.91; evalue=0; confidence=high
Rice	`Os01g0108200` (OsPOP1) - identity=69; qcov=0.917; evalue=0; confidence=high
GO	GO:0004252 (serine-type endopeptidase activity); GO:0005829 (cytosol); GO:0006508 (proteolysis); GO:0070012 (oligopeptidase activity)
KEGG	-
Pfam	PF00326 (Peptidase_S9); PF02897 (Peptidase_S9_N)
InterPro	-
eggNOG	-
NR	GeneID:131012986

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cytosol	细胞质基质	1.00000	`XP_057796960.1`
2	Peroxisome	过氧化物酶体	0.20000	`XP_057796960.1`
3	Nucleus	细胞核	0.00000	`XP_057796960.1`
4	Chromosome	染色体	0.00000	`XP_057796960.1`
5	Centromere	着丝粒	0.00000	`XP_057796960.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:64754472`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C64,C66
`Chr2:64754659`	`G`	`GA`	1bp_insertion	frameshift_variant	1	C29
`Chr2:64754659`	`G`	`GA`	1bp_insertion	CDS_variant	1	C29
`Chr2:64754820`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	A5,B61,C43,C55,C65
`Chr2:64755325`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C51,D7
`Chr2:64755347`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	C51,D7
`Chr2:64755352`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B113
`Chr2:64757077`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D6
`Chr2:64757127`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C51,D7
`Chr2:64757333`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C51,D7
`Chr2:64757370`	`TAC`	`T`	2bp_deletion	frameshift_variant	1	B40
`Chr2:64757370`	`TAC`	`T`	2bp_deletion	CDS_variant	1	B40

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057796960.1

807 aa

404

807

Peptidase_S9_N

Peptidase_S9

PF02897 Peptidase_S9_N 80-495 aa PF00326 Peptidase_S9 563-738 aa

XP_057796961.1

797 aa

398

797

Peptidase_S9_N

Peptidase_S9

PF02897 Peptidase_S9_N 80-495 aa PF00326 Peptidase_S9 563-792 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057796960.1`	Pfam	`PF02897`	Peptidase_S9_N	Repeat	80	495	5.3e-136	454.4	Prolyl oligopeptidase, N-terminal beta-propeller domain
`XP_057796960.1`	Pfam	`PF00326`	Peptidase_S9	Domain	563	738	4.7e-51	174.0	Prolyl oligopeptidase family
`XP_057796961.1`	Pfam	`PF02897`	Peptidase_S9_N	Repeat	80	495	5.1e-136	454.4	Prolyl oligopeptidase, N-terminal beta-propeller domain
`XP_057796961.1`	Pfam	`PF00326`	Peptidase_S9	Domain	563	792	1.3e-58	198.8	Prolyl oligopeptidase family

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057940978.1
GTTGAAATTTTATATTTCCCGAAAAAACTAAAACTGACGTATCACACATTTCTTTACGATGTTGATTTGCACTCGCCACGCGCTCACAATTCTGTCGTCGTCATCTCTACTATATCCTGTCCAATTCACGCGCCGCCTAAGATATTTCCGCCTTCTCACTGTTTCTGTCTCTTCTTCTAAGAGACATTTACTCGAACACGGTACATCACGAAAAAGGTTATCCTGTAATTCTACTTCTCCGTCAACATCTTTGCCAATGG...

XM_057940977.1
TTGAAATTTTATATTTCCCGAAAAAACTAAAACTGACGTATCACACATTTCTTTACGATGTTGATTTGCACTCGCCACGCGCTCACAATTCTGTCGTCGTCATCTCTACTATATCCTGTCCAATTCACGCGCCGCCTAAGATATTTCCGCCTTCTCACTGTTTCTGTCTCTTCTTCTAAGAGACATTTACTCGAACACGGTACATCACGAAAAAGGTTATCCTGTAATTCTACTTCTCCGTCAACATCTTTGCCAATGGG...

CDS

2 records

下载 CDS FASTA

LOC131012986
ATGTTGATTTGCACTCGCCACGCGCTCACAATTCTGTCGTCGTCATCTCTACTATATCCTGTCCAATTCACGCGCCGCCTAAGATATTTCCGCCTTCTCACTGTTTCTGTCTCTTCTTCTAAGAGACATTTACTCGAACACGGTACATCACGAAAAAGGTTATCCTGTAATTCTACTTCTCCGTCAACATCTTTGCCAATGGGATCGCTCTCCGCCTTCGACGGCATTCTGCAATACCCCGTCGCTCGTCGCGACGACTC...

Protein

2 records

下载 Protein FASTA

XP_057796960.1
MLICTRHALTILSSSSLLYPVQFTRRLRYFRLLTVSVSSSKRHLLEHGTSRKRLSCNSTSPSTSLPMGSLSAFDGILQYPVARRDDSVVDNHHGVEVPDPYRWLEDPDSAETREFVEKQMNLTDSVLKTCETREKLREKLTKLYDFPKYNAPFRVGDKYFYFHNTGLQPQTVLYVQDSLEGEPEVLLDPNMLSDDGTVALSEYAVSEDAKYLAYGTSSSGSDWVTIKVIRIDDKSTEPDVISWVKFSGISWTHDSKGFFY...

XP_057796961.1
MLICTRHALTILSSSSLLYPVQFTRRLRYFRLLTVSVSSSKRHLLEHGTSRKRLSCNSTSPSTSLPMGSLSAFDGILQYPVARRDDSVVDNHHGVEVPDPYRWLEDPDSAETREFVEKQMNLTDSVLKTCETREKLREKLTKLYDFPKYNAPFRVGDKYFYFHNTGLQPQTVLYVQDSLEGEPEVLLDPNMLSDDGTVALSEYAVSEDAKYLAYGTSSSGSDWVTIKVIRIDDKSTEPDVISWVKFSGISWTHDSKGFFY...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

下载 upstream 下载 downstream 下载 upstream + gene + downstream

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