当前解析结果
SmilChr02G004264| 统一新 Gene ID | SmilChr02G004264 |
|---|---|
| 名称 | SmilChr02G004264 |
| 描述 | uncharacterized SmilChr02G004264 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 64843914 - 64845650 / - |
| NCBI Gene ID | LOC131013020 |
|---|---|
| GeneID | 131013020 |
| locus_tag | - |
| NCBI Name | LOC131013020 |
| 原始查询 | SmilChr02G004264 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838631]; symbol=AT1G20430; hit=AT1G20430; species=arabidopsis; confidence=medium |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838631]; symbol=AT1G20430; hit=AT1G20430; species=arabidopsis; confidence=medium |
| Arabidopsis | AT1G20430 (AT1G20430)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:838631] identity=47.1; qcov=0.791; evalue=1.36e-24; confidence=medium |
| Rice | Os06g0213900- identity=43.2; qcov=0.736; evalue=2.23e-18; confidence=low |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131013020 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057797005.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057797005.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 0.20000 | XP_057797005.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057797005.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057797005.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:64844123 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B57 |
Chr2:64844143 |
A |
AG |
1bp_insertion | frameshift_variant | 4 | B113,B25,B29,C74 |
Chr2:64844143 |
A |
AG |
1bp_insertion | CDS_variant | 4 | B113,B25,B29,C74 |
Chr2:64844150 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | A24 |
Chr2:64844173 |
G |
A |
EMS_canonical_SNV | CDS_variant | 5 | B134,B35,B98,C59,C62 |
Chr2:64844198 |
G |
A |
EMS_canonical_SNV | stop_gained | 45 | A11,A14,A19,A21,A7,A8,A9,B100,B101,B113,B122,B129,B131,B137,B14,B2,B20,B21,B28,B29,B32,B35,B39,B51,B60,B61,B65,B7,B81,B92,B99,C11,C14,C25,C29,C30,C41,C43,C45,C5,C51,C55,C64,C74,D10 |
Chr2:64844291 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | A10,B14,B19,B28 |
Chr2:64844320 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B101,B66,B91 |
Chr2:64844337 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C47 |
Chr2:64844438 |
TG |
T |
1bp_deletion | frameshift_variant | 37 | A10,A24,A6,A8,B100,B103,B11,B123,B125,B129,B136,B138,B139,B17,B2,B21,B25,B29,B32,B39,B5,B57,B7,B79,B82,B86,B9,B91,B94,C23,C25,C30,C31,C36,C45,C64,C69 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
4 records
下载 cDNA FASTA4 records
下载 CDS FASTA4 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。