Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G004432`

染色体: Chr02 坐标: 66678498-66687304 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G004432`
名称	SmilChr02G004432
描述	ABC transporter G family member 35-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	66678498 - 66687304 / `-`

ID 对照

NCBI Gene ID	`LOC131013178`
GeneID	`131013178`
locus_tag	`-`
NCBI Name	`LOC131013178`
原始查询	`SmilChr02G004432`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	ABC transporter G family member 35-like
产物	ABC transporter G family member 35-like
Arabidopsis	`AT1G59870` (PEN3) ABC-2 and Plant PDR ABC-type transporter family protein [Source:NCBI gene (formerly Entrezgene);Acc:842281] identity=71.6; qcov=0.986; evalue=0; confidence=high
Rice	`Os06g0554800` (OsABCG42) - identity=73.1; qcov=0.794; evalue=0; confidence=high
GO	GO:0005524 (ATP binding); GO:0016020 (membrane); GO:0016887 (ATP hydrolysis activity); GO:0140359 (ABC-type transporter activity)
KEGG	smil02010 (ABC transporters - Salvia miltiorrhiza (redroot sage))
Pfam	PF00005 (ABC_tran); PF01061 (ABC2_membrane); PF08370 (PDR_assoc); PF14510 (ABC_trans_N); PF19055 (ABC2_membrane_7)
InterPro	-
eggNOG	-
NR	GeneID:131013178

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Cell membrane	细胞膜	1.00000	`XP_057797212.1`
2	Nucleus	细胞核	0.00000	`XP_057797212.1`
3	Chromosome	染色体	0.00000	`XP_057797212.1`
4	Centromere	着丝粒	0.00000	`XP_057797212.1`
5	Chromatin	染色质	0.00000	`XP_057797212.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:66678693`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C37
`Chr2:66679207`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B63,B83,C37
`Chr2:66679475`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B13,B40,C78
`Chr2:66679481`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C5
`Chr2:66679505`	`G`	`A`	EMS_canonical_SNV	CDS_variant	5	B2,B69,C36,C37,D10
`Chr2:66679711`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B118,B73,B84,C47
`Chr2:66679717`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B29
`Chr2:66679834`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B62,C64,C66,C77,D6
`Chr2:66680465`	`G`	`A`	EMS_canonical_SNV	CDS_variant	4	B62,C64,C66,D6
`Chr2:66680552`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C5
`Chr2:66680663`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B29
`Chr2:66680687`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B110,B125,B52

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057797212.1

1487 aa

744

1487

ABC_trans_N

ABC_tran

ABC2_membrane_7

ABC2_membrane

PDR_assoc

ABC_tran

ABC2_membrane_7

ABC2_membrane

PF14510 ABC_trans_N 106-155 aa PF00005 ABC_tran 181-362 aa PF19055 ABC2_membrane_7 396-448 aa PF01061 ABC2_membrane 517-728 aa PF08370 PDR_assoc 734-798 aa PF00005 ABC_tran 911-1063 aa PF19055 ABC2_membrane_7 1092-1151 aa PF01061 ABC2_membrane 1209-1422 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057797212.1`	Pfam	`PF14510`	ABC_trans_N	Domain	106	155	1.6e-08	35.5	ABC-transporter N-terminal
`XP_057797212.1`	Pfam	`PF00005`	ABC_tran	Domain	181	362	1.8e-38	132.9	ABC transporter
`XP_057797212.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	396	448	2.8e-14	53.6	ABC-2 type transporter
`XP_057797212.1`	Pfam	`PF01061`	ABC2_membrane	Domain	517	728	1.9e-110	368.1	ABC-2 type transporter
`XP_057797212.1`	Pfam	`PF08370`	PDR_assoc	Family	734	798	1.4e-28	99.1	Plant PDR ABC transporter associated
`XP_057797212.1`	Pfam	`PF00005`	ABC_tran	Domain	911	1063	1.8e-38	132.9	ABC transporter
`XP_057797212.1`	Pfam	`PF19055`	ABC2_membrane_7	Family	1092	1151	2.8e-14	53.6	ABC-2 type transporter
`XP_057797212.1`	Pfam	`PF01061`	ABC2_membrane	Domain	1209	1422	1.9e-110	368.1	ABC-2 type transporter

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

1 records

下载 cDNA FASTA

XM_057941229.1
TCGCCTTGGACTCTTGCAAAATCATCACTTCTCAAAACTCTCCAAGACTTTTTCACAAAGAGAGTAACATTTTAAAAAACTAGCAAAAAATGGTTTGGAAACAATCAAACTAAATCTATCAAACCAAAAACACTCCTATTTCTAACCCTTTCAACTCCCCCACCGAACCCACATTCTATCCAAAATTCTCTTCATTTTCATACAAAATTGTCGATCCATTTCTTGAAACAATCCGCAAGAAATGGACGATCGGATGAGGC...

CDS

1 records

下载 CDS FASTA

LOC131013178
ATGGACGATCGGATGAGGCGTTCGCGGCGGCAACAGAGCCGCAGTTCCAGCCGGAGCAACTGGATTGTGGAGGAGGTGTTCTCCGGCTCGGCGGCGTCGAGGCAGAGCGTTAGGGCGGACGAGGATGAGGAGGCGCTGAGATGGGCGGCGCTGGAGAAGCTCCCCACCTACGATAGGCTGAGGAAAACAGTGCTTAAATCGTTCATGGAAACTTCGAATCAAGGGAAAGTTAAGGTTGTCCACAAAGAGATTGATGTGAG...

Protein

1 records

下载 Protein FASTA

XP_057797212.1
MDDRMRRSRRQQSRSSSRSNWIVEEVFSGSAASRQSVRADEDEEALRWAALEKLPTYDRLRKTVLKSFMETSNQGKVKVVHKEIDVRKMDMNEKQEFIDRFFKVAEEDNEKFLTKFRDRIEKVGISLPTVEVRFEHLSVEADCFVGDRALPTLINTARNIGEMALGCLGIRLAQKTKLTILKDVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDPTLKTRGEITYNGHMLNEFVPQKTSAYISQNDVHVGEMTVKETL...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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