当前解析结果
SmilChr02G004516| 统一新 Gene ID | SmilChr02G004516 |
|---|---|
| 名称 | SmilChr02G004516 |
| 描述 | uncharacterized SmilChr02G004516 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 67693963 - 67695138 / + |
| NCBI Gene ID | LOC131009914 |
|---|---|
| GeneID | 131009914 |
| locus_tag | - |
| NCBI Name | LOC131009914 |
| 原始查询 | SmilChr02G004516 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=weak |
| 产物 | zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629]; symbol=AT2G01050; hit=AT2G01050; species=arabidopsis; confidence=weak |
| Arabidopsis | AT2G01050 (AT2G01050)zinc ion binding / nucleic acid binding protein [Source:NCBI gene (formerly Entrezgene);Acc:814629] identity=23.4; qcov=0.516; evalue=4.99e-13; confidence=weak |
| Rice | -- |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131009914 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoplasm | 细胞质 | 1.00000 | XP_057793297.1 |
| 2 | Cytosol | 细胞质基质 | 0.60000 | XP_057793297.1 |
| 3 | Nucleus | 细胞核 | 0.00000 | XP_057793297.1 |
| 4 | Chromosome | 染色体 | 0.00000 | XP_057793297.1 |
| 5 | Centromere | 着丝粒 | 0.00000 | XP_057793297.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:67694023 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C17,C21 |
Chr2:67694046 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B122,B26,C33 |
Chr2:67694083 |
C |
T |
EMS_canonical_SNV | stop_gained | 7 | A3,B122,B26,B62,B7,B9,B90 |
Chr2:67694089 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C39,D1 |
Chr2:67694104 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C32 |
Chr2:67694112 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B59,C78,C8,C85 |
Chr2:67694123 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | C58,C76,D1 |
Chr2:67694139 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B22 |
Chr2:67694143 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | C16,C49 |
Chr2:67694185 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D4 |
Chr2:67694189 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | A14,C15,C5 |
Chr2:67694211 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A23,B106,B60,B65 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。