当前解析结果
SmilChr02G004559| 统一新 Gene ID | SmilChr02G004559 |
|---|---|
| 名称 | SmilChr02G004559 |
| 描述 | uncharacterized SmilChr02G004559 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 68111899 - 68113130 / + |
| NCBI Gene ID | LOC131008553 |
|---|---|
| GeneID | 131008553 |
| locus_tag | - |
| NCBI Name | LOC131008553 |
| 原始查询 | SmilChr02G004559 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | NFU1 iron-sulfur cluster protein [Source:NCBI gene (formerly Entrezgene);Acc:830624]; symbol=AT5G07330; hit=AT5G07330; species=arabidopsis; confidence=medium |
| 产物 | NFU1 iron-sulfur cluster protein [Source:NCBI gene (formerly Entrezgene);Acc:830624]; symbol=AT5G07330; hit=AT5G07330; species=arabidopsis; confidence=medium |
| Arabidopsis | AT5G07330 (AT5G07330)NFU1 iron-sulfur cluster protein [Source:NCBI gene (formerly Entrezgene);Acc:830624] identity=40.5; qcov=0.988; evalue=5.13e-40; confidence=medium |
| Rice | Os11g0533400- identity=47.2; qcov=0.655; evalue=1.47e-25; confidence=medium |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008553 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Mitochondrion | 线粒体 | 1.00000 | XP_057791447.1 |
| 2 | Mitochondrion membrane | 线粒体膜 | 1.00000 | XP_057791447.1 |
| 3 | Mitochondrion inner membrane | 线粒体内膜 | 1.00000 | XP_057791448.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057791447.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057791447.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:68112138 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B140 |
Chr2:68112247 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B94,B98 |
Chr2:68112292 |
C |
T |
EMS_canonical_SNV | CDS_variant | 4 | B53,B55,C16,C21 |
Chr2:68112849 |
A |
AT |
1bp_insertion | frameshift_variant | 14 | A6,B112,B139,B31,B41,B81,B9,C14,C54,C64,C66,C86,D1,D10 |
Chr2:68112899 |
G |
GT |
1bp_insertion | stop_gained,frameshift_variant | 7 | B126,B129,B94,C4,C75,D1,D6 |
Chr2:68112928 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | A21,B33,C8,C85 |
Chr2:68112933 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr2:68112941 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B35 |
Chr2:68112959 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C37 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
2 records
下载 cDNA FASTA2 records
下载 CDS FASTA2 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。