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中文 EN

Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。
示例

当前解析结果

SmilChr02G004642

染色体: Chr02 坐标: 68869286-68876813 链方向: - 类型: protein_coding

基本信息

统一新 Gene IDSmilChr02G004642
名称SmilChr02G004642
描述pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like
染色体 / SeqIDChr02 / NC_080388.1
坐标与链方向68869286 - 68876813 / -

ID 对照

NCBI Gene IDLOC131008635
GeneID131008635
locus_tag-
NCBI NameLOC131008635
原始查询SmilChr02G004642

查看完整 ID 对照表

功能注释

来源GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述pentatricopeptide repeat-containing protein At1g62914, mitochondrial-like
产物pentatricopeptide repeat-containing protein At1g62914%2C mitochondrial-like
ArabidopsisAT1G62670 (RPF2)
rna processing factor 2 [Source:NCBI gene (formerly Entrezgene);Acc:842564]
identity=34.5; qcov=1.05; evalue=2.79e-121; confidence=low
RiceOs03g0597200 (YSA)
-
identity=28.9; qcov=0.883; evalue=5.2e-76; confidence=low
GOGO:0005515 (protein binding)
KEGG-
PfamPF01535 (PPR); PF12854 (PPR_1); PF13041 (PPR_2); PF13812 (PPR_3); PF17177 (PPR_long); PF23276 (TPR_24)
InterPro-
eggNOG-
NRGeneID:131008635

打开注释模块

亚细胞定位 Top 5

Rank定位位置中文ScoreProtein ID
1 Mitochondrion 线粒体 0.80000 XP_057791559.1
2 Chloroplast 叶绿体 0.20000 XP_057791559.1
3 Nucleus 细胞核 0.00000 XP_057791559.1
4 Chromosome 染色体 0.00000 XP_057791559.1
5 Centromere 着丝粒 0.00000 XP_057791559.1

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置 REF ALT 类型 影响 携带材料数 材料
Chr2:68874500 C T EMS_canonical_SNV CDS_variant 1 B124
Chr2:68874621 C T EMS_canonical_SNV CDS_variant 2 C18,D6
Chr2:68874762 C T EMS_canonical_SNV CDS_variant 2 B13,C63
Chr2:68875097 G A EMS_canonical_SNV CDS_variant 4 B109,B13,C16,D1
Chr2:68875130 C T EMS_canonical_SNV CDS_variant 2 B107,C73
Chr2:68875231 G A EMS_canonical_SNV CDS_variant 2 C27,C49
Chr2:68875336 G A EMS_canonical_SNV CDS_variant 1 B25
Chr2:68875348 C T EMS_canonical_SNV CDS_variant 1 B13
Chr2:68875350 C T EMS_canonical_SNV CDS_variant 1 B109
Chr2:68875422 G A EMS_canonical_SNV CDS_variant 1 B69
Chr2:68875433 C T EMS_canonical_SNV CDS_variant 1 B51
Chr2:68875451 C T EMS_canonical_SNV CDS_variant 4 B137,B6,C52,C67

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057791559.1
749 aa
N
1
374
749
PPR_3
PPR_2
PPR
PPR
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
TPR_24
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_2
PPR
PPR_1
PPR
PPR_2
PPR_3
PPR_1
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR_long
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_2
PPR
C
PF13812 PPR_3 70-115 aa PF13041 PPR_2 81-129 aa PF01535 PPR 85-113 aa PF01535 PPR 155-184 aa PF01535 PPR 194-218 aa PF23276 TPR_24 194-314 aa PF13812 PPR_3 222-268 aa PF12854 PPR_1 223-252 aa PF13041 PPR_2 223-271 aa PF01535 PPR 227-256 aa PF12854 PPR_1 254-286 aa PF13041 PPR_2 258-307 aa PF01535 PPR 261-290 aa PF13812 PPR_3 282-340 aa PF23276 TPR_24 286-386 aa PF12854 PPR_1 291-322 aa PF13041 PPR_2 294-341 aa PF01535 PPR 296-326 aa PF12854 PPR_1 325-354 aa PF13041 PPR_2 328-365 aa PF01535 PPR 331-356 aa PF12854 PPR_1 360-388 aa PF13041 PPR_2 363-411 aa PF01535 PPR 366-395 aa PF17177 PPR_long 368-500 aa PF13812 PPR_3 388-442 aa PF13041 PPR_2 399-447 aa PF01535 PPR 401-429 aa PF12854 PPR_1 430-459 aa PF01535 PPR 436-466 aa PF13041 PPR_2 436-481 aa PF13812 PPR_3 456-511 aa PF12854 PPR_1 464-495 aa PF01535 PPR 472-497 aa PF12854 PPR_1 496-520 aa PF13041 PPR_2 498-545 aa PF01535 PPR 503-530 aa PF13812 PPR_3 522-578 aa PF12854 PPR_1 529-562 aa PF13041 PPR_2 534-582 aa PF17177 PPR_long 536-635 aa PF01535 PPR 537-564 aa PF13812 PPR_3 556-612 aa PF12854 PPR_1 565-596 aa PF13041 PPR_2 568-617 aa PF01535 PPR 571-601 aa PF12854 PPR_1 599-630 aa PF01535 PPR 606-630 aa PF13812 PPR_3 628-680 aa PF12854 PPR_1 635-667 aa PF13041 PPR_2 638-687 aa PF01535 PPR 642-671 aa PF13041 PPR_2 675-716 aa PF01535 PPR 676-706 aa
XP_057791560.1
749 aa
N
1
374
749
PPR_3
PPR_2
PPR
PPR
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
TPR_24
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_2
PPR
PPR_1
PPR
PPR_2
PPR_3
PPR_1
PPR
PPR_1
PPR_2
PPR
PPR_3
PPR_1
PPR_2
PPR_long
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR_3
PPR_1
PPR_2
PPR
PPR_2
PPR
C
PF13812 PPR_3 70-115 aa PF13041 PPR_2 81-129 aa PF01535 PPR 85-113 aa PF01535 PPR 155-184 aa PF01535 PPR 194-218 aa PF23276 TPR_24 194-314 aa PF13812 PPR_3 222-268 aa PF12854 PPR_1 223-252 aa PF13041 PPR_2 223-271 aa PF01535 PPR 227-256 aa PF12854 PPR_1 254-286 aa PF13041 PPR_2 258-307 aa PF01535 PPR 261-290 aa PF13812 PPR_3 282-340 aa PF23276 TPR_24 286-386 aa PF12854 PPR_1 291-322 aa PF13041 PPR_2 294-341 aa PF01535 PPR 296-326 aa PF12854 PPR_1 325-354 aa PF13041 PPR_2 328-365 aa PF01535 PPR 331-356 aa PF12854 PPR_1 360-388 aa PF13041 PPR_2 363-411 aa PF01535 PPR 366-395 aa PF17177 PPR_long 368-500 aa PF13812 PPR_3 388-442 aa PF13041 PPR_2 399-447 aa PF01535 PPR 401-429 aa PF12854 PPR_1 430-459 aa PF01535 PPR 436-466 aa PF13041 PPR_2 436-481 aa PF13812 PPR_3 456-511 aa PF12854 PPR_1 464-495 aa PF01535 PPR 472-497 aa PF12854 PPR_1 496-520 aa PF13041 PPR_2 498-545 aa PF01535 PPR 503-530 aa PF13812 PPR_3 522-578 aa PF12854 PPR_1 529-562 aa PF13041 PPR_2 534-582 aa PF17177 PPR_long 536-635 aa PF01535 PPR 537-564 aa PF13812 PPR_3 556-612 aa PF12854 PPR_1 565-596 aa PF13041 PPR_2 568-617 aa PF01535 PPR 571-601 aa PF12854 PPR_1 599-630 aa PF01535 PPR 606-630 aa PF13812 PPR_3 628-680 aa PF12854 PPR_1 635-667 aa PF13041 PPR_2 638-687 aa PF01535 PPR 642-671 aa PF13041 PPR_2 675-716 aa PF01535 PPR 676-706 aa
XP_057791561.1
575 aa
N
1
288
575
PPR_3
PPR_2
PPR
PPR
PPR
TPR_24
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_3
TPR_24
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
PPR_long
PPR_3
PPR_1
PPR_2
PPR
PPR_1
PPR
PPR_2
PPR_3
PPR_1
PPR
PPR_1
PPR_2
PPR
PPR_1
PPR_2
PPR
C
PF13812 PPR_3 70-115 aa PF13041 PPR_2 81-129 aa PF01535 PPR 85-113 aa PF01535 PPR 155-184 aa PF01535 PPR 194-218 aa PF23276 TPR_24 194-304 aa PF13812 PPR_3 222-268 aa PF12854 PPR_1 223-252 aa PF13041 PPR_2 223-271 aa PF01535 PPR 227-256 aa PF12854 PPR_1 254-286 aa PF13041 PPR_2 258-307 aa PF01535 PPR 261-290 aa PF13812 PPR_3 282-340 aa PF23276 TPR_24 286-387 aa PF12854 PPR_1 291-322 aa PF13041 PPR_2 294-341 aa PF01535 PPR 296-326 aa PF12854 PPR_1 325-354 aa PF13041 PPR_2 328-365 aa PF01535 PPR 331-356 aa PF12854 PPR_1 360-388 aa PF13041 PPR_2 363-411 aa PF01535 PPR 366-395 aa PF17177 PPR_long 367-500 aa PF13812 PPR_3 388-442 aa PF12854 PPR_1 394-427 aa PF13041 PPR_2 399-447 aa PF01535 PPR 401-429 aa PF12854 PPR_1 430-459 aa PF01535 PPR 436-466 aa PF13041 PPR_2 436-481 aa PF13812 PPR_3 456-511 aa PF12854 PPR_1 464-495 aa PF01535 PPR 472-497 aa PF12854 PPR_1 496-520 aa PF13041 PPR_2 498-545 aa PF01535 PPR 503-530 aa PF12854 PPR_1 529-562 aa PF13041 PPR_2 534-566 aa PF01535 PPR 537-564 aa
Protein ID 来源 结构域编号 结构域名称 类型 起始 aa 终止 aa E-value Score 说明
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 70 115 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 81 129 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 85 113 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF01535 PPR Repeat 155 184 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF01535 PPR Repeat 194 218 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF23276 TPR_24 Repeat 194 314 8.5e-36 123.5 Pentatricopeptide repeat-containing protein
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 222 268 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 223 252 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 223 271 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 227 256 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 254 286 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 258 307 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 261 290 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 282 340 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF23276 TPR_24 Repeat 286 386 8.5e-36 123.5 Pentatricopeptide repeat-containing protein
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 291 322 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 294 341 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 296 326 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 325 354 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 328 365 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 331 356 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 360 388 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 363 411 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 366 395 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF17177 PPR_long Repeat 368 500 7.3e-38 130.8 Pentacotripeptide-repeat region of PRORP
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 388 442 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 399 447 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 401 429 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 430 459 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF01535 PPR Repeat 436 466 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 436 481 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 456 511 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 464 495 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF01535 PPR Repeat 472 497 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 496 520 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 498 545 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 503 530 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 522 578 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 529 562 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 534 582 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF17177 PPR_long Repeat 536 635 7.3e-38 130.8 Pentacotripeptide-repeat region of PRORP
XP_057791559.1 Pfam PF01535 PPR Repeat 537 564 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 556 612 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 565 596 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 568 617 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 571 601 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 599 630 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF01535 PPR Repeat 606 630 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF13812 PPR_3 Repeat 628 680 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791559.1 Pfam PF12854 PPR_1 Repeat 635 667 6.4e-165 535.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 638 687 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 642 671 2.8e-120 385.2 PPR repeat
XP_057791559.1 Pfam PF13041 PPR_2 Repeat 675 716 7.4e-190 615.8 PPR repeat family
XP_057791559.1 Pfam PF01535 PPR Repeat 676 706 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 70 115 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 81 129 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 85 113 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF01535 PPR Repeat 155 184 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF01535 PPR Repeat 194 218 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF23276 TPR_24 Repeat 194 314 8.5e-36 123.5 Pentatricopeptide repeat-containing protein
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 222 268 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 223 252 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 223 271 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 227 256 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 254 286 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 258 307 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 261 290 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 282 340 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF23276 TPR_24 Repeat 286 386 8.5e-36 123.5 Pentatricopeptide repeat-containing protein
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 291 322 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 294 341 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 296 326 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 325 354 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 328 365 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 331 356 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 360 388 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 363 411 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 366 395 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF17177 PPR_long Repeat 368 500 7.3e-38 130.8 Pentacotripeptide-repeat region of PRORP
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 388 442 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 399 447 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 401 429 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 430 459 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF01535 PPR Repeat 436 466 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 436 481 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 456 511 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 464 495 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF01535 PPR Repeat 472 497 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 496 520 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 498 545 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 503 530 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 522 578 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 529 562 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 534 582 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF17177 PPR_long Repeat 536 635 7.3e-38 130.8 Pentacotripeptide-repeat region of PRORP
XP_057791560.1 Pfam PF01535 PPR Repeat 537 564 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 556 612 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 565 596 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 568 617 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 571 601 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 599 630 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF01535 PPR Repeat 606 630 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF13812 PPR_3 Repeat 628 680 8.8e-72 237.8 Pentatricopeptide repeat domain
XP_057791560.1 Pfam PF12854 PPR_1 Repeat 635 667 6.4e-165 535.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 638 687 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 642 671 2.8e-120 385.2 PPR repeat
XP_057791560.1 Pfam PF13041 PPR_2 Repeat 675 716 7.4e-190 615.8 PPR repeat family
XP_057791560.1 Pfam PF01535 PPR Repeat 676 706 2.8e-120 385.2 PPR repeat
XP_057791561.1 Pfam PF13812 PPR_3 Repeat 70 115 1.2e-53 179.8 Pentatricopeptide repeat domain
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 81 129 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 85 113 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF01535 PPR Repeat 155 184 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF01535 PPR Repeat 194 218 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF23276 TPR_24 Repeat 194 304 4.7e-26 92.0 Pentatricopeptide repeat-containing protein
XP_057791561.1 Pfam PF13812 PPR_3 Repeat 222 268 1.2e-53 179.8 Pentatricopeptide repeat domain
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 223 252 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 223 271 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 227 256 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 254 286 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 258 307 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 261 290 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF13812 PPR_3 Repeat 282 340 1.2e-53 179.8 Pentatricopeptide repeat domain
XP_057791561.1 Pfam PF23276 TPR_24 Repeat 286 387 4.7e-26 92.0 Pentatricopeptide repeat-containing protein
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 291 322 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 294 341 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 296 326 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 325 354 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 328 365 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 331 356 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 360 388 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 363 411 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 366 395 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF17177 PPR_long Repeat 367 500 9e-26 91.3 Pentacotripeptide-repeat region of PRORP
XP_057791561.1 Pfam PF13812 PPR_3 Repeat 388 442 1.2e-53 179.8 Pentatricopeptide repeat domain
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 394 427 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 399 447 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 401 429 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 430 459 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF01535 PPR Repeat 436 466 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 436 481 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF13812 PPR_3 Repeat 456 511 1.2e-53 179.8 Pentatricopeptide repeat domain
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 464 495 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF01535 PPR Repeat 472 497 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 496 520 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 498 545 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 503 530 1e-93 301.9 PPR repeat
XP_057791561.1 Pfam PF12854 PPR_1 Repeat 529 562 4.9e-124 404.4 PPR repeat
XP_057791561.1 Pfam PF13041 PPR_2 Repeat 534 566 1.6e-138 451.4 PPR repeat family
XP_057791561.1 Pfam PF01535 PPR Repeat 537 564 1e-93 301.9 PPR repeat

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA
XM_057935578.1
AACCTTTGAATACATGCGGTATAATATACTCAAAATAAATCTCTTTTGAAACTTTTCCCTTTTCACTATACGCCGAAGACTTAGCCACCGATGAAGATGAGCAGAAAAACCGCTGCTTCTGCCACTAATCTGAATCGTAGAAGACGAGTTGCTTCTCCTGAAATCGGTAATTATGTTCCACCATTCTCTTATTTCTGTTCGAATTTCCATTGTTTCAGTGGCAATGATCGACTCCTTTCACCTGAGCCGCCCAGATTAGA...
XM_057935576.1
CTTTGAATACATGCGGTATAATATACTCAAAATAAATCTCTTTTGAAACTTTTCCCTTTTCACTATACGCCGAAGACTTAGCCACCGATGAAGATGAGCAGAAAAACCGCTGCTTCTGCCACTAATCTGAATCGTAGAAGACGAGTTGCTTCTCCTGAAATCGGTAATTATGTTCCACCATTCTCTTATTTCTGTTCGAATTTCCATTGTTTCAGTGGCAATGATCGACTCCTTTCACCTGAGCCGCCCAGATTAGATTT...

CDS

3 records

下载 CDS FASTA
LOC131008635
ATGAAGATGAGCAGAAAAACCGCTGCTTCTGCCACTAATCTGAATCGTAGAAGACGAGTTGCTTCTCCTGAAATCGGTAATTATGTTCCACCATTCTCTTATTTCTGTTCGAATTTCCATTGTTTCAGTGGCAATGATCGACTCCTTTCACCTGAGCCGCCCAGATTAGATTTCAGTAGCATTAAAGAATTAGATAATGCTATTCAGTTGTTTCACCAAATGGTGAGAATGCGTCCACAGCCTTCTGCTCGCATGTACAA...
LOC131008635
ATGAAGATGAGCAGAAAAACCGCTGCTTCTGCCACTAATCTGAATCGTAGAAGACGAGTTGCTTCTCCTGAAATCGGTAATTATGTTCCACCATTCTCTTATTTCTGTTCGAATTTCCATTGTTTCAGTGGCAATGATCGACTCCTTTCACCTGAGCCGCCCAGATTAGATTTCAGTAGCATTAAAGAATTAGATAATGCTATTCAGTTGTTTCACCAAATGGTGAGAATGCGTCCACAGCCTTCTGCTCGCATGTACAA...

Protein

3 records

下载 Protein FASTA
XP_057791559.1
MKMSRKTAASATNLNRRRRVASPEIGNYVPPFSYFCSNFHCFSGNDRLLSPEPPRLDFSSIKELDNAIQLFHQMVRMRPQPSARMYNNLLSVIAKMKQYSFALHVFDEMRRMGAPVNGYTMNIAINCYCLQERVGFGFSVMGILLKSGFEPDATTFNTLIRGLLLDDKVSGAVEMFENILSFGICKPDDVMILTIIDGLCKSGHVLIAHDLLRRLEEKIRWRPNVKAYNAVLDGLCKCGMVGDAFQLLSEMVGKGVSPTV...
XP_057791560.1
MKMSRKTAASATNLNRRRRVASPEIGNYVPPFSYFCSNFHCFSGNDRLLSPEPPRLDFSSIKELDNAIQLFHQMVRMRPQPSARMYNNLLSVIAKMKQYSFALHVFDEMRRMGAPVNGYTMNIAINCYCLQERVGFGFSVMGILLKSGFEPDATTFNTLIRGLLLDDKVSGAVEMFENILSFGICKPDDVMILTIIDGLCKSGHVLIAHDLLRRLEEKIRWRPNVKAYNAVLDGLCKCGMVGDAFQLLSEMVGKGVSPTV...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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