Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G004673`

染色体: Chr02 坐标: 69091695-69095754 链方向: - 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G004673`
名称	SmilChr02G004673
描述	glucose-6-phosphate 1-dehydrogenase, chloroplastic-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	69091695 - 69095754 / `-`

ID 对照

NCBI Gene ID	`LOC131008663`
GeneID	`131008663`
locus_tag	`-`
NCBI Name	`LOC131008663`
原始查询	`SmilChr02G004673`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; KEGG smil; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	glucose-6-phosphate 1-dehydrogenase, chloroplastic-like
产物	glucose-6-phosphate 1-dehydrogenase%2C chloroplastic-like
Arabidopsis	`AT5G35790` (G6PD1) glucose-6-phosphate dehydrogenase 1 [Source:NCBI gene (formerly Entrezgene);Acc:833559] identity=79.8; qcov=0.825; evalue=0; confidence=high
Rice	`Os03g0412800` (OsG6PDH4) - identity=80.4; qcov=0.795; evalue=0; confidence=high
GO	GO:0004345 (glucose-6-phosphate dehydrogenase activity); GO:0006006 (glucose metabolic process); GO:0009051 (pentose-phosphate shunt, oxidative branch); GO:0009570 (chloroplast stroma); GO:0050661 (NADP binding)
KEGG	smil00030 (Pentose phosphate pathway - Salvia miltiorrhiza (redroot sage)); smil00480 (Glutathione metabolism - Salvia miltiorrhiza (redroot sage)); smil01100 (Metabolic pathways - Salvia miltiorrhiza (redroot sage)); smil01110 (Biosynthesis of secondary metabolites - Salvia miltiorrhiza (redroot sage)); smil01200 (Carbon metabolism - Salvia miltiorrhiza (redroot sage))
Pfam	PF00479 (G6PD_N); PF02781 (G6PD_C)
InterPro	-
eggNOG	-
NR	GeneID:131008663

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Chloroplast	叶绿体	1.00000	`XP_057791608.1`
2	Cytoplasm	细胞质	1.00000	`XP_057791609.1`
3	Chloroplast stroma	叶绿体基质	1.00000	`XP_057791608.1`
4	Cytosol	细胞质基质	1.00000	`XP_057791609.1`
5	Nucleus	细胞核	0.00000	`XP_057791608.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:69092287`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B97,C48
`Chr2:69092400`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	D11
`Chr2:69092677`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B20
`Chr2:69092702`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B42,B43
`Chr2:69092762`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	B42,B43
`Chr2:69094134`	`CTG`	`C`	2bp_deletion	frameshift_variant	30	A14,A18,A19,B115,B12,B131,B138,B17,B20,B23,B49,B62,B67,B68,B78,C29,C31,C40,C42,C46,C47,C50,C6,C71,C73,C8,C84,C9,D2,D5
`Chr2:69094256`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C49
`Chr2:69094458`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr2:69094459`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr2:69094511`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	B94
`Chr2:69094529`	`C`	`T`	EMS_canonical_SNV	CDS_variant	4	B18,B91,D10,D11
`Chr2:69095292`	`G`	`A`	EMS_canonical_SNV	stop_gained	4	B36,B61,C8,C85

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057791608.1

586 aa

293

586

G6PD_N

G6PD_C

PF00479 G6PD_N 104-282 aa PF02781 G6PD_C 285-579 aa

XP_057791609.1

511 aa

256

511

G6PD_N

G6PD_C

PF00479 G6PD_N 29-207 aa PF02781 G6PD_C 210-504 aa

XP_057791610.1

474 aa

237

474

G6PD_N

G6PD_C

PF00479 G6PD_N 104-282 aa PF02781 G6PD_C 285-437 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057791608.1`	Pfam	`PF00479`	G6PD_N	Domain	104	282	1.2e-58	199.5	Glucose-6-phosphate dehydrogenase, NAD binding domain
`XP_057791608.1`	Pfam	`PF02781`	G6PD_C	Domain	285	579	1.7e-111	372.7	Glucose-6-phosphate dehydrogenase, C-terminal domain
`XP_057791609.1`	Pfam	`PF00479`	G6PD_N	Domain	29	207	9.3e-59	199.9	Glucose-6-phosphate dehydrogenase, NAD binding domain
`XP_057791609.1`	Pfam	`PF02781`	G6PD_C	Domain	210	504	1.2e-111	373.2	Glucose-6-phosphate dehydrogenase, C-terminal domain
`XP_057791610.1`	Pfam	`PF00479`	G6PD_N	Domain	104	282	9.9e-59	199.8	Glucose-6-phosphate dehydrogenase, NAD binding domain
`XP_057791610.1`	Pfam	`PF02781`	G6PD_C	Domain	285	437	1.6e-64	218.5	Glucose-6-phosphate dehydrogenase, C-terminal domain

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

3 records

下载 cDNA FASTA

XM_057935625.1
CAAGATTGGATAATGTAGTAAGAGAAAAAATCTCGACCTCATATAAAGGATTAGCATTTGAAAATCTCTAATTTTCCTACAACAATCAATGTCTCTCAGTTATAGGCAAAAGCCACTCTCAAAGAATCTAATACATAGGGAAAATATATATACATATATCAAACAAATATCCCAAGCAATCGAAGAATTTCAATCCCGTAGCCCATAATTTTCTCGAATGAAAGGTGTGATTTTTGCAGAGAATTAAAGCTTCCCACCTG...

XM_057935627.1
AAGGATTAGCATTTGAAAATCTCTAATTTTCCTACAACAATCAATGTCTCTCAGTTATAGGCAAAAGCCACTCTCAAAGAATCTAATACATAGGGAAAATATATATACATATATCAAACAAATATCCCAAGCAATCGAAGAATTTCAATCCCGTAGCCCATAATTTTCTCGAATGAAAGGTGTGATTTTTGCAGAGAATTAAAGCTTCCCACCTGAAAAACAATCGAGAAAAATCATTGGAGCCTGCTTTCTTGAAATAT...

CDS

3 records

下载 CDS FASTA

LOC131008663
ATGGCTAAATTATTGAGCAATCCTTGTTGTTATTCATCATCTTCAACCACATTTTCTTGTTTCCACAATGAGAGTTTGTGTAGTTCAAGAAATCTGGCGGCTGTACCAATTTCAAGCCATTTCTCAAAGTGGGCTCCCAACAATTTTACAAGAATTCAGCTAAGAAGCAGCAATTTTGAGCTGAGGTCATCGAATGGGTATCCTCTTAATGCTGTTTCTTTGCAAGATGAGGGTTCAGTTGACAATCCCCTTGCAGAAGA...

LOC131008663
ATGGAGGGTTCAGTTGACAATCCCCTTGCAGAAGAAGCCAATTTTTCTGATTCAGCAGAAGGGGATTCTACTCTAAGCATTACGGTTGTTGGTGCATCGGGCGATCTTGCAAAGAAGAAGATCTTTCCTGCTCTTTTTGCTCTCTATTATGAGGGTTGGCTTCCTGAGAATTTTGTTATTTTTGGTTATTCTCGGACCAATATGAGTGATGAGGAGTTGAGAAACATGATCAGCAGAACCTTGACTTGCAGGATTGATCA...

Protein

3 records

下载 Protein FASTA

XP_057791608.1
MAKLLSNPCCYSSSSTTFSCFHNESLCSSRNLAAVPISSHFSKWAPNNFTRIQLRSSNFELRSSNGYPLNAVSLQDEGSVDNPLAEEANFSDSAEGDSTLSITVVGASGDLAKKKIFPALFALYYEGWLPENFVIFGYSRTNMSDEELRNMISRTLTCRIDQRENCDDKMTQFLKRCFYHSGQYNSEEHFLELDCKLKEKEGGGLSNRLFYLSVPPNIFVDVARCVSTGASSTTGWTRVIVEKPFGRDSESSRELTRCLK...

XP_057791609.1
MEGSVDNPLAEEANFSDSAEGDSTLSITVVGASGDLAKKKIFPALFALYYEGWLPENFVIFGYSRTNMSDEELRNMISRTLTCRIDQRENCDDKMTQFLKRCFYHSGQYNSEEHFLELDCKLKEKEGGGLSNRLFYLSVPPNIFVDVARCVSTGASSTTGWTRVIVEKPFGRDSESSRELTRCLKQYLSEDQIFRIDHYLGKELVENLSVLRFSNLVFEPLWSRDYIRNVQFIFSEDFGTEGRGGYFDNYGIIRDIMQNH...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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