当前解析结果
SmilChr02G004903| 统一新 Gene ID | SmilChr02G004903 |
|---|---|
| 名称 | SmilChr02G004903 |
| 描述 | BAG family molecular chaperone regulator 8, chloroplastic-like |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 71024095 - 71025732 / + |
| NCBI Gene ID | LOC131008897 |
|---|---|
| GeneID | 131008897 |
| locus_tag | - |
| NCBI Name | LOC131008897 |
| 原始查询 | SmilChr02G004903 |
| 来源 | GFF basic annotation; NCBI GO GAF; Arabidopsis/Rice homolog |
|---|---|
| 描述 | BAG family molecular chaperone regulator 8, chloroplastic-like |
| 产物 | BAG family molecular chaperone regulator 8%2C chloroplastic-like |
| Arabidopsis | AT3G29310 (AT3G29310)calmodulin-binding protein-like protein [Source:NCBI gene (formerly Entrezgene);Acc:822589] identity=31.6; qcov=0.939; evalue=6.29e-31; confidence=low |
| Rice | Os05g0512400- identity=50.5; qcov=0.246; evalue=3.26e-22; confidence=weak |
| GO | GO:0006457 (protein folding); GO:0009506 (plasmodesma); GO:0051087 (protein-folding chaperone binding) |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008897 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Nucleus | 细胞核 | 1.00000 | XP_057791982.1 |
| 2 | Cytoplasm | 细胞质 | 0.40000 | XP_057791982.1 |
| 3 | Chromosome | 染色体 | 0.00000 | XP_057791982.1 |
| 4 | Centromere | 着丝粒 | 0.00000 | XP_057791982.1 |
| 5 | Chromatin | 染色质 | 0.00000 | XP_057791982.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:71024234 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B44 |
Chr2:71024273 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | A1,B118,C63 |
Chr2:71024312 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C28 |
Chr2:71024317 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B49,C33 |
Chr2:71024339 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B98 |
Chr2:71024452 |
TCC |
T |
2bp_deletion | frameshift_variant | 9 | A11,B3,B31,C19,C3,C4,C6,C60,C86 |
Chr2:71024458 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | A4 |
Chr2:71024468 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C16 |
Chr2:71024483 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | A3,B12 |
Chr2:71024656 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B129,C22 |
Chr2:71024815 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B104 |
Chr2:71024868 |
C |
T |
EMS_canonical_SNV | CDS_variant | 3 | B2,B90,C11 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。