当前解析结果
SmilChr02G004906| 统一新 Gene ID | SmilChr02G004906 |
|---|---|
| 名称 | SmilChr02G004906 |
| 描述 | uncharacterized SmilChr02G004906 |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 71045183 - 71049431 / - |
| NCBI Gene ID | LOC131008904 |
|---|---|
| GeneID | 131008904 |
| locus_tag | - |
| NCBI Name | LOC131008904 |
| 原始查询 | SmilChr02G004906 |
| 来源 | GFF basic annotation; Arabidopsis/Rice homolog |
|---|---|
| 描述 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843794]; symbol=AT1G74530; hit=AT1G74530; species=arabidopsis; confidence=high |
| 产物 | uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843794]; symbol=AT1G74530; hit=AT1G74530; species=arabidopsis; confidence=high |
| Arabidopsis | AT1G74530 (AT1G74530)uncharacterized protein [Source:NCBI gene (formerly Entrezgene);Acc:843794] identity=60.1; qcov=0.944; evalue=5.25e-120; confidence=high |
| Rice | Os08g0171000- identity=58; qcov=0.854; evalue=5.12e-115; confidence=high |
| GO | - |
| KEGG | - |
| Pfam | - |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008904 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Endoplasmic reticulum | 内质网 | 1.00000 | XP_057791995.1 |
| 2 | Endoplasmic reticulum lumen | 内质网腔 | 0.20000 | XP_057791995.1 |
| 3 | Endoplasmic reticulum membrane | 内质网膜 | 0.20000 | XP_057791995.1 |
| 4 | Nucleus | 细胞核 | 0.00000 | XP_057791995.1 |
| 5 | Chromosome | 染色体 | 0.00000 | XP_057791995.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变;完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:71045421 |
C |
T |
EMS_canonical_SNV | CDS_variant | 5 | B23,B28,B53,B73,B88 |
Chr2:71045739 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | C30,C77 |
Chr2:71046041 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D3 |
Chr2:71046663 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B13,B78 |
Chr2:71046760 |
GT |
G |
1bp_deletion | frameshift_variant | 13 | A11,B131,B16,B37,B40,B56,B65,B82,B94,B96,C20,C64,C66 |
Chr2:71046761 |
T |
TG |
1bp_insertion | frameshift_variant | 13 | A11,B131,B16,B37,B40,B56,B65,B82,B94,B96,C20,C64,C66 |
Chr2:71047060 |
G |
A |
EMS_canonical_SNV | CDS_variant | 2 | B98,C35 |
Chr2:71047874 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | D6 |
Chr2:71047876 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B84 |
Chr2:71047907 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C80 |
Chr2:71047919 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B132,B61,C27 |
Chr2:71048018 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | C74 |
每个公开基因均提供参考注释对应的转录本序列;蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
3 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补,使最终 FASTA 为转录方向 5′→3′。