当前解析结果
SmilChr02G005040| 统一新 Gene ID | SmilChr02G005040 |
|---|---|
| 名称 | SmilChr02G005040 |
| 描述 | kinesin-like protein KIN-14I |
| 染色体 / SeqID | Chr02 / NC_080388.1 |
| 坐标与链方向 | 72131253 - 72136802 / + |
| NCBI Gene ID | LOC131008912 |
|---|---|
| GeneID | 131008912 |
| locus_tag | - |
| NCBI Name | LOC131008912 |
| 原始查询 | SmilChr02G005040 |
| 来源 | GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog |
|---|---|
| 描述 | kinesin-like protein KIN-14I |
| 产物 | kinesin-like protein KIN-14I |
| Arabidopsis | AT2G47500 (AT2G47500)P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain-containing protein [Source:NCBI gene (formerly Entrezgene);Acc:819363] identity=52.7; qcov=1.02; evalue=0; confidence=high |
| Rice | Os12g0547500 (OsKCH1)- identity=59; qcov=0.764; evalue=0; confidence=high |
| GO | GO:0003777 (microtubule motor activity); GO:0005524 (ATP binding); GO:0007018 (microtubule-based movement); GO:0008017 (microtubule binding) |
| KEGG | - |
| Pfam | PF00225 (Kinesin); PF00307 (CH); PF16796 (Microtub_bd) |
| InterPro | - |
| eggNOG | - |
| NR | GeneID:131008912 |
| Rank | 定位位置 | 中文 | Score | Protein ID |
|---|---|---|---|---|
| 1 | Cytoskeleton | 细胞骨架 | 1.00000 | XP_057792007.1 |
| 2 | Phragmoplast | Phragmoplast | 1.00000 | XP_057792007.1 |
| 3 | Cytosol | 细胞质基质 | 0.80000 | XP_057792007.1 |
| 4 | Spindle | Spindle | 0.20000 | XP_057792007.1 |
| 5 | Nucleus | 细胞核 | 0.00000 | XP_057792007.1 |
下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。
| 位置 | REF | ALT | 类型 | 影响 | 携带材料数 | 材料 |
|---|---|---|---|---|---|---|
Chr2:72131642 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B13 |
Chr2:72131643 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C78 |
Chr2:72131655 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B1 |
Chr2:72131907 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B129 |
Chr2:72131922 |
C |
T |
EMS_canonical_SNV | CDS_variant | 2 | B111,B113 |
Chr2:72131947 |
G |
A |
EMS_canonical_SNV | CDS_variant | 4 | B111,C57,C7,C75 |
Chr2:72131954 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C74 |
Chr2:72132178 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | C29,C40,C75 |
Chr2:72132222 |
C |
T |
EMS_canonical_SNV | CDS_variant | 1 | B74 |
Chr2:72132275 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | B108 |
Chr2:72132489 |
G |
A |
EMS_canonical_SNV | CDS_variant | 3 | B56,B96,C35 |
Chr2:72132510 |
G |
A |
EMS_canonical_SNV | CDS_variant | 1 | C55 |
结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。
XP_057792007.1PF00307
CH 60-159 aa
PF16796
Microtub_bd 384-543 aa
PF00225
Kinesin 431-723 aa
| Protein ID | 来源 | 结构域编号 | 结构域名称 | 类型 | 起始 aa | 终止 aa | E-value | Score | 说明 |
|---|---|---|---|---|---|---|---|---|---|
XP_057792007.1 |
Pfam | PF00307 |
CH | Domain | 60 | 159 | 9.3e-15 | 55.5 | Calponin homology (CH) domain |
XP_057792007.1 |
Pfam | PF16796 |
Microtub_bd | Domain | 384 | 543 | 2e-44 | 152.0 | Microtubule binding |
XP_057792007.1 |
Pfam | PF00225 |
Kinesin | Domain | 431 | 723 | 2e-108 | 363.0 | Kinesin motor domain |
每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。
1 records
下载 cDNA FASTA1 records
下载 CDS FASTA1 records
下载 Protein FASTAupstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。