Gene Card 基因详情

支持统一新 ID、NCBI Gene ID、GeneID、locus_tag、Transcript ID、Protein ID，以及已人工核对的文献基因名查询。页面会先解析到丹参统一基因，再整合坐标、序列、注释、亚细胞定位、EMS 突变和下载入口。

当前解析结果

`SmilChr02G005152`

染色体: Chr02 坐标: 72887356-72893574 链方向: + 类型: protein_coding

基本信息

统一新 Gene ID	`SmilChr02G005152`
名称	SmilChr02G005152
描述	cytochrome P450 CYP72A219-like
染色体 / SeqID	Chr02 / NC_080388.1
坐标与链方向	72887356 - 72893574 / `+`

ID 对照

NCBI Gene ID	`LOC131009144`
GeneID	`131009144`
locus_tag	`-`
NCBI Name	`LOC131009144`
原始查询	`SmilChr02G005152`

查看完整 ID 对照表

功能注释

来源	GFF basic annotation; NCBI GO GAF; Pfam-A/HMMER; Arabidopsis/Rice homolog
描述	cytochrome P450 CYP72A219-like
产物	cytochrome P450 CYP72A219-like
Arabidopsis	`AT3G14690` (CYP72A15) cytochrome P450, family 72, subfamily A, polypeptide 15 [Source:NCBI gene (formerly Entrezgene);Acc:820697] identity=59.5; qcov=1; evalue=5.52e-155; confidence=high
Rice	`Os01g0627800` - identity=58.5; qcov=1.01; evalue=6.84e-148; confidence=high
GO	GO:0004497 (monooxygenase activity); GO:0005506 (iron ion binding); GO:0016705 (oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen); GO:0020037 (heme binding)
KEGG	-
Pfam	PF00067 (p450)
InterPro	-
eggNOG	-
NR	GeneID:131009144

打开注释模块

亚细胞定位 Top 5

Rank	定位位置	中文	Score	Protein ID
1	Endoplasmic reticulum	内质网	1.00000	`XP_057792350.1`
2	Endoplasmic reticulum membrane	内质网膜	0.80000	`XP_057792350.1`
3	Nucleus	细胞核	0.00000	`XP_057792350.1`
4	Chromosome	染色体	0.00000	`XP_057792350.1`
5	Centromere	着丝粒	0.00000	`XP_057792350.1`

进入亚细胞定位查询

EMS 诱变突变

下表显示该基因在丹参 EMS 材料中的前 12 个候选突变；完整结果可进入 EMS 突变库继续筛选或下载。

位置	REF	ALT	类型	影响	携带材料数	材料
`Chr2:72887532`	`C`	`T`	EMS_canonical_SNV	CDS_variant	3	B21,B38,C24
`Chr2:72887591`	`C`	`T`	EMS_canonical_SNV	CDS_variant	1	C48
`Chr2:72887623`	`C`	`T`	EMS_canonical_SNV	CDS_variant	5	B105,B14,B42,B70,C60
`Chr2:72887707`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C26,D8
`Chr2:72891176`	`GA`	`G`	1bp_deletion	frameshift_variant	1	B37
`Chr2:72891176`	`GA`	`G`	1bp_deletion	CDS_variant	1	B37
`Chr2:72891211`	`TTG`	`T`	2bp_deletion	frameshift_variant	1	A22
`Chr2:72891211`	`TTG`	`T`	2bp_deletion	CDS_variant	1	A22
`Chr2:72891777`	`G`	`A`	EMS_canonical_SNV	CDS_variant	2	B3,B67
`Chr2:72891778`	`G`	`A`	EMS_canonical_SNV	CDS_variant	1	C38
`Chr2:72891863`	`G`	`A`	EMS_canonical_SNV	CDS_variant	3	B104,B67,B82
`Chr2:72891902`	`C`	`T`	EMS_canonical_SNV	CDS_variant	2	C73,C74

进入 EMS 突变库

预测功能结构域

结构域结果来自 Pfam-A HMM 数据库和 HMMER hmmscan；位置为对应蛋白序列上的氨基酸坐标。

XP_057792350.1

512 aa

256

512

p450

PF00067 p450 87-486 aa

XP_057792351.1

350 aa

175

350

p450

PF00067 p450 12-324 aa

Protein ID	来源	结构域编号	结构域名称	类型	起始 aa	终止 aa	E-value	Score	说明
`XP_057792350.1`	Pfam	`PF00067`	p450	Domain	87	486	2.9e-79	267.7	Cytochrome P450
`XP_057792351.1`	Pfam	`PF00067`	p450	Domain	12	324	4.5e-66	224.2	Cytochrome P450

cDNA / CDS / Protein 序列

下载基因组 DNA（仅基因区域）

每个公开基因均提供参考注释对应的转录本序列；蛋白编码基因另提供 CDS 和蛋白序列。非编码 RNA 不适用 CDS 或蛋白下载。真实 accession 的版本后缀予以保留。

cDNA

2 records

下载 cDNA FASTA

XM_057936367.1
TATCTCCTCAGCTATCGATCATCTTCAATAAACTTCTTCCCTTTTCTCTTCTCTTCTCTTTGAGTGCAAAAAAATCAATTAACTAAGCATGGATGTTTTCATTTCTACAGTGGAAATTTCTTGCGGTTTCGTAGCTCTAATATATGTATGGAAACTATTGAATTGGGTGTGGTTTACCCCCAAAAAACTCGAAAAATTACTGCGGCAGCAGGGCTTCAACGGAAATTCTTACAAGCTTTTCTATGGAGATTTCAAAGAGA...

XM_057936368.1
ATTCTTACAAGCTTTTCTATGGAGATTTCAAAGAGATAAGGAGCATCGCCAAAGAAGCCGTGTCCAAACCTATGAATTTTTCAAACGATATTGCGCCTAGAGCTATTCCCATCTACTACCAAACCTGCAAAAGATATGCATATGGTTCCATCGTTCTACTTGAGCTGCGGTGAAATGTTGAGCAAATGGGATGAGATTGTGGGAATTGGAAATGAAGGTGAGGTGGATGTGTGGCCTCATCTCCAGACAATGACGAGCGA...

CDS

2 records

下载 CDS FASTA

LOC131009144
ATGGATGTTTTCATTTCTACAGTGGAAATTTCTTGCGGTTTCGTAGCTCTAATATATGTATGGAAACTATTGAATTGGGTGTGGTTTACCCCCAAAAAACTCGAAAAATTACTGCGGCAGCAGGGCTTCAACGGAAATTCTTACAAGCTTTTCTATGGAGATTTCAAAGAGATAAGGAGCATCGCCAAAGAAGCCGTGTCCAAACCTATGAATTTTTCAAACGATATTGCGCCTAGAGCTATTCCCATCTACTACCAAAC...

LOC131009144
ATGCATATGGTTCCATCGTTCTACTTGAGCTGCGGTGAAATGTTGAGCAAATGGGATGAGATTGTGGGAATTGGAAATGAAGGTGAGGTGGATGTGTGGCCTCATCTCCAGACAATGACGAGCGATGTGATTTCAAGAACTGCCTTTGGGAGTAGCTACGAGGAAGGAAGAAAGATATTTGAACTACAACGAGAGCAGGGCAAGCTCATCATGGACTCCACTCGCTCTCTCTATATCCCCGGATGGAGGTTTGTGCCGAC...

Protein

2 records

下载 Protein FASTA

XP_057792350.1
MDVFISTVEISCGFVALIYVWKLLNWVWFTPKKLEKLLRQQGFNGNSYKLFYGDFKEIRSIAKEAVSKPMNFSNDIAPRAIPIYYQTCKRYGEKSFTWFGPKPAVNITEPEMIREITSKNYVFQKPGNPFGKMLAKGVASYETDKWAKHRKLINPAFHVDKLKHMVPSFYLSCGEMLSKWDEIVGIGNEGEVDVWPHLQTMTSDVISRTAFGSSYEEGRKIFELQREQGKLIMDSTRSLYIPGWRFVPTKFNRRMKELST...

XP_057792351.1
MHMVPSFYLSCGEMLSKWDEIVGIGNEGEVDVWPHLQTMTSDVISRTAFGSSYEEGRKIFELQREQGKLIMDSTRSLYIPGWRFVPTKFNRRMKELSTEIKSLVLGIIKKRMNAAEGSADDLLGLLLESNLKEMKQHGNESGMSIEDVIEECKLFYFTGQETTSSLLVWTMILLSKHDDWQARARDEVLQVFGRGKPDYQELNHLKTVNMILHEALRLYPPGVSLTRSTHKEARFGKISIPAGVQLVLPVLAVHHNTRLW...

上下游序列下载

upstream/downstream 最大各 10000 bp。负链基因会自动反向互补，使最终 FASTA 为转录方向 5′→3′。

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